Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G08390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0007172: signal complex assembly0.00E+00
2GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:0009734: auxin-activated signaling pathway5.18E-06
5GO:0015995: chlorophyll biosynthetic process8.06E-06
6GO:0006782: protoporphyrinogen IX biosynthetic process2.10E-05
7GO:0009640: photomorphogenesis2.17E-05
8GO:0009926: auxin polar transport2.17E-05
9GO:0000476: maturation of 4.5S rRNA3.00E-05
10GO:0000967: rRNA 5'-end processing3.00E-05
11GO:0010480: microsporocyte differentiation3.00E-05
12GO:0009934: regulation of meristem structural organization4.04E-05
13GO:0009733: response to auxin6.21E-05
14GO:0010541: acropetal auxin transport7.58E-05
15GO:0034470: ncRNA processing7.58E-05
16GO:0040008: regulation of growth1.27E-04
17GO:0010160: formation of animal organ boundary1.32E-04
18GO:0043481: anthocyanin accumulation in tissues in response to UV light1.97E-04
19GO:0010438: cellular response to sulfur starvation3.42E-04
20GO:0032973: amino acid export4.20E-04
21GO:0009228: thiamine biosynthetic process4.20E-04
22GO:0060918: auxin transport4.20E-04
23GO:0009759: indole glucosinolate biosynthetic process4.20E-04
24GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.20E-04
25GO:0009942: longitudinal axis specification5.02E-04
26GO:0050829: defense response to Gram-negative bacterium5.88E-04
27GO:0043090: amino acid import5.88E-04
28GO:0048437: floral organ development5.88E-04
29GO:0009642: response to light intensity6.76E-04
30GO:0046620: regulation of organ growth6.76E-04
31GO:0009657: plastid organization7.68E-04
32GO:0007389: pattern specification process7.68E-04
33GO:0010206: photosystem II repair8.63E-04
34GO:0080144: amino acid homeostasis8.63E-04
35GO:0006783: heme biosynthetic process8.63E-04
36GO:0006779: porphyrin-containing compound biosynthetic process9.61E-04
37GO:0009742: brassinosteroid mediated signaling pathway1.01E-03
38GO:0043085: positive regulation of catalytic activity1.16E-03
39GO:1903507: negative regulation of nucleic acid-templated transcription1.16E-03
40GO:0048229: gametophyte development1.16E-03
41GO:0007275: multicellular organism development1.17E-03
42GO:0002213: defense response to insect1.27E-03
43GO:0008361: regulation of cell size1.27E-03
44GO:0010075: regulation of meristem growth1.38E-03
45GO:0010540: basipetal auxin transport1.50E-03
46GO:0006636: unsaturated fatty acid biosynthetic process1.73E-03
47GO:0000162: tryptophan biosynthetic process1.73E-03
48GO:0016114: terpenoid biosynthetic process2.11E-03
49GO:2000022: regulation of jasmonic acid mediated signaling pathway2.25E-03
50GO:0048443: stamen development2.52E-03
51GO:0048653: anther development2.80E-03
52GO:0009958: positive gravitropism2.94E-03
53GO:0006662: glycerol ether metabolic process2.94E-03
54GO:0009741: response to brassinosteroid2.94E-03
55GO:0030154: cell differentiation2.96E-03
56GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.15E-03
57GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.40E-03
58GO:0010583: response to cyclopentenone3.55E-03
59GO:0010252: auxin homeostasis3.87E-03
60GO:0009639: response to red or far red light3.87E-03
61GO:0048364: root development4.66E-03
62GO:0010218: response to far red light5.60E-03
63GO:0009631: cold acclimation5.78E-03
64GO:0048527: lateral root development5.78E-03
65GO:0007568: aging5.78E-03
66GO:0006865: amino acid transport5.97E-03
67GO:0016051: carbohydrate biosynthetic process6.16E-03
68GO:0009637: response to blue light6.16E-03
69GO:0034599: cellular response to oxidative stress6.35E-03
70GO:0010114: response to red light7.34E-03
71GO:0031347: regulation of defense response8.38E-03
72GO:0009664: plant-type cell wall organization8.60E-03
73GO:0009585: red, far-red light phototransduction9.03E-03
74GO:0045893: positive regulation of transcription, DNA-templated9.08E-03
75GO:0006468: protein phosphorylation9.30E-03
76GO:0006351: transcription, DNA-templated9.52E-03
77GO:0006417: regulation of translation9.70E-03
78GO:0055085: transmembrane transport1.00E-02
79GO:0009740: gibberellic acid mediated signaling pathway1.11E-02
80GO:0042545: cell wall modification1.13E-02
81GO:0006396: RNA processing1.18E-02
82GO:0006633: fatty acid biosynthetic process1.59E-02
83GO:0045490: pectin catabolic process1.70E-02
84GO:0007166: cell surface receptor signaling pathway1.87E-02
85GO:0009826: unidimensional cell growth2.26E-02
86GO:0046777: protein autophosphorylation2.84E-02
87GO:0015979: photosynthesis2.98E-02
88GO:0045454: cell redox homeostasis3.08E-02
89GO:0045892: negative regulation of transcription, DNA-templated3.11E-02
90GO:0016042: lipid catabolic process3.50E-02
91GO:0006629: lipid metabolic process3.58E-02
92GO:0006397: mRNA processing3.69E-02
93GO:0009753: response to jasmonic acid3.76E-02
94GO:0008152: metabolic process3.83E-02
95GO:0006357: regulation of transcription from RNA polymerase II promoter4.37E-02
RankGO TermAdjusted P value
1GO:0001158: enhancer sequence-specific DNA binding0.00E+00
2GO:0034639: L-amino acid efflux transmembrane transporter activity0.00E+00
3GO:0004853: uroporphyrinogen decarboxylase activity3.00E-05
4GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity3.00E-05
5GO:0010329: auxin efflux transmembrane transporter activity3.49E-05
6GO:0033612: receptor serine/threonine kinase binding7.45E-05
7GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity7.58E-05
8GO:0004312: fatty acid synthase activity7.58E-05
9GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity1.32E-04
10GO:0016846: carbon-sulfur lyase activity3.42E-04
11GO:0004712: protein serine/threonine/tyrosine kinase activity4.36E-04
12GO:0043621: protein self-association5.52E-04
13GO:0009672: auxin:proton symporter activity9.61E-04
14GO:0008047: enzyme activator activity1.06E-03
15GO:0015020: glucuronosyltransferase activity1.06E-03
16GO:0047372: acylglycerol lipase activity1.16E-03
17GO:0031072: heat shock protein binding1.38E-03
18GO:0003714: transcription corepressor activity1.86E-03
19GO:0003756: protein disulfide isomerase activity2.52E-03
20GO:0003727: single-stranded RNA binding2.52E-03
21GO:0016301: kinase activity2.54E-03
22GO:0047134: protein-disulfide reductase activity2.66E-03
23GO:0004791: thioredoxin-disulfide reductase activity3.09E-03
24GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.71E-03
25GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.03E-03
26GO:0016168: chlorophyll binding4.53E-03
27GO:0008375: acetylglucosaminyltransferase activity4.70E-03
28GO:0005096: GTPase activator activity5.41E-03
29GO:0005515: protein binding6.36E-03
30GO:0015171: amino acid transmembrane transporter activity9.70E-03
31GO:0045330: aspartyl esterase activity9.70E-03
32GO:0030599: pectinesterase activity1.11E-02
33GO:0051082: unfolded protein binding1.16E-02
34GO:0015035: protein disulfide oxidoreductase activity1.18E-02
35GO:0046910: pectinesterase inhibitor activity1.62E-02
36GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.62E-02
37GO:0004674: protein serine/threonine kinase activity2.00E-02
38GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.02E-02
39GO:0005524: ATP binding2.21E-02
40GO:0046982: protein heterodimerization activity2.29E-02
41GO:0016788: hydrolase activity, acting on ester bonds2.36E-02
42GO:0052689: carboxylic ester hydrolase activity2.91E-02
43GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.08E-02
44GO:0004871: signal transducer activity3.18E-02
45GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.32E-02
46GO:0016787: hydrolase activity3.45E-02
47GO:0008289: lipid binding4.52E-02
RankGO TermAdjusted P value
1GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
2GO:0009534: chloroplast thylakoid2.62E-08
3GO:0009570: chloroplast stroma6.92E-05
4GO:0009531: secondary cell wall1.97E-04
5GO:0016602: CCAAT-binding factor complex1.38E-03
6GO:0009535: chloroplast thylakoid membrane1.42E-03
7GO:0005886: plasma membrane2.16E-03
8GO:0009522: photosystem I3.09E-03
9GO:0071944: cell periphery3.71E-03
10GO:0009507: chloroplast4.17E-03
11GO:0009941: chloroplast envelope4.37E-03
12GO:0000325: plant-type vacuole5.78E-03
13GO:0031977: thylakoid lumen6.94E-03
14GO:0009579: thylakoid9.46E-03
15GO:0009543: chloroplast thylakoid lumen1.36E-02
16GO:0005623: cell1.38E-02
17GO:0009506: plasmodesma2.08E-02
18GO:0016020: membrane2.39E-02
19GO:0031969: chloroplast membrane2.71E-02
Gene type



Gene DE type