Gene: AT1G06190
     


Gene description


TAIR ID: AT1G06190

Short description: Rho termination factor

Pathogen responsiveness: -0.75

General responsiveness: 0.40

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G168335  

Wheat: No orthologous gene

GO biological process


DNA-templated transcription, termination, chloroplast rRNA processing, chloroplast mRNA processing, response to abscisic acid


GO cellular component


chloroplast, nucleus


GO molecular function


unkown


Protein domain


PfamPF07498, Rho termination factor, N-terminal domain
SMARTSM00959, Rho_N

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G66600

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

No Interactor


Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.471.61E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.412.91E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.921.06E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.522.67E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.714.28E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.586.33E-12






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