GO Enrichment Analysis of Co-expressed Genes with
AT1G06190
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1900000: regulation of anthocyanin catabolic process | 0.00E+00 |
| 2 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 3 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 4 | GO:0010027: thylakoid membrane organization | 9.90E-05 |
| 5 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.14E-04 |
| 6 | GO:1904964: positive regulation of phytol biosynthetic process | 1.14E-04 |
| 7 | GO:0042371: vitamin K biosynthetic process | 1.14E-04 |
| 8 | GO:0043686: co-translational protein modification | 1.14E-04 |
| 9 | GO:0034337: RNA folding | 1.14E-04 |
| 10 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.14E-04 |
| 11 | GO:0010115: regulation of abscisic acid biosynthetic process | 2.65E-04 |
| 12 | GO:0006729: tetrahydrobiopterin biosynthetic process | 2.65E-04 |
| 13 | GO:0010289: homogalacturonan biosynthetic process | 2.65E-04 |
| 14 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.65E-04 |
| 15 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.65E-04 |
| 16 | GO:0090391: granum assembly | 4.38E-04 |
| 17 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 4.38E-04 |
| 18 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 4.38E-04 |
| 19 | GO:0015979: photosynthesis | 6.00E-04 |
| 20 | GO:0034059: response to anoxia | 6.29E-04 |
| 21 | GO:0009765: photosynthesis, light harvesting | 8.35E-04 |
| 22 | GO:0010236: plastoquinone biosynthetic process | 1.05E-03 |
| 23 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.05E-03 |
| 24 | GO:0031365: N-terminal protein amino acid modification | 1.05E-03 |
| 25 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.29E-03 |
| 26 | GO:0010190: cytochrome b6f complex assembly | 1.29E-03 |
| 27 | GO:0006561: proline biosynthetic process | 1.29E-03 |
| 28 | GO:0010405: arabinogalactan protein metabolic process | 1.29E-03 |
| 29 | GO:0006751: glutathione catabolic process | 1.29E-03 |
| 30 | GO:0016554: cytidine to uridine editing | 1.29E-03 |
| 31 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.29E-03 |
| 32 | GO:0015995: chlorophyll biosynthetic process | 1.53E-03 |
| 33 | GO:0042372: phylloquinone biosynthetic process | 1.54E-03 |
| 34 | GO:0017148: negative regulation of translation | 1.54E-03 |
| 35 | GO:0010019: chloroplast-nucleus signaling pathway | 1.54E-03 |
| 36 | GO:1901259: chloroplast rRNA processing | 1.54E-03 |
| 37 | GO:0010444: guard mother cell differentiation | 1.81E-03 |
| 38 | GO:0006400: tRNA modification | 1.81E-03 |
| 39 | GO:0009772: photosynthetic electron transport in photosystem II | 1.81E-03 |
| 40 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.81E-03 |
| 41 | GO:0010196: nonphotochemical quenching | 1.81E-03 |
| 42 | GO:0009735: response to cytokinin | 1.83E-03 |
| 43 | GO:0009690: cytokinin metabolic process | 2.09E-03 |
| 44 | GO:0006605: protein targeting | 2.09E-03 |
| 45 | GO:0016051: carbohydrate biosynthetic process | 2.13E-03 |
| 46 | GO:0009245: lipid A biosynthetic process | 2.70E-03 |
| 47 | GO:1900865: chloroplast RNA modification | 3.02E-03 |
| 48 | GO:0006535: cysteine biosynthetic process from serine | 3.36E-03 |
| 49 | GO:0009688: abscisic acid biosynthetic process | 3.36E-03 |
| 50 | GO:0045036: protein targeting to chloroplast | 3.36E-03 |
| 51 | GO:0009073: aromatic amino acid family biosynthetic process | 3.71E-03 |
| 52 | GO:1903507: negative regulation of nucleic acid-templated transcription | 3.71E-03 |
| 53 | GO:0009750: response to fructose | 3.71E-03 |
| 54 | GO:0009773: photosynthetic electron transport in photosystem I | 3.71E-03 |
| 55 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.06E-03 |
| 56 | GO:0050826: response to freezing | 4.43E-03 |
| 57 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.43E-03 |
| 58 | GO:0008152: metabolic process | 5.49E-03 |
| 59 | GO:0010025: wax biosynthetic process | 5.61E-03 |
| 60 | GO:0019344: cysteine biosynthetic process | 6.03E-03 |
| 61 | GO:0016998: cell wall macromolecule catabolic process | 6.89E-03 |
| 62 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 7.34E-03 |
| 63 | GO:0009790: embryo development | 7.61E-03 |
| 64 | GO:0009306: protein secretion | 8.26E-03 |
| 65 | GO:0000413: protein peptidyl-prolyl isomerization | 9.23E-03 |
| 66 | GO:0042631: cellular response to water deprivation | 9.23E-03 |
| 67 | GO:0010182: sugar mediated signaling pathway | 9.73E-03 |
| 68 | GO:0009416: response to light stimulus | 1.01E-02 |
| 69 | GO:0007166: cell surface receptor signaling pathway | 1.03E-02 |
| 70 | GO:0000302: response to reactive oxygen species | 1.13E-02 |
| 71 | GO:0016032: viral process | 1.18E-02 |
| 72 | GO:0009567: double fertilization forming a zygote and endosperm | 1.29E-02 |
| 73 | GO:0051607: defense response to virus | 1.40E-02 |
| 74 | GO:0006457: protein folding | 1.40E-02 |
| 75 | GO:0010411: xyloglucan metabolic process | 1.64E-02 |
| 76 | GO:0018298: protein-chromophore linkage | 1.77E-02 |
| 77 | GO:0000160: phosphorelay signal transduction system | 1.83E-02 |
| 78 | GO:0009631: cold acclimation | 1.96E-02 |
| 79 | GO:0034599: cellular response to oxidative stress | 2.16E-02 |
| 80 | GO:0016042: lipid catabolic process | 2.49E-02 |
| 81 | GO:0042546: cell wall biogenesis | 2.57E-02 |
| 82 | GO:0031347: regulation of defense response | 2.87E-02 |
| 83 | GO:0009736: cytokinin-activated signaling pathway | 3.09E-02 |
| 84 | GO:0006364: rRNA processing | 3.09E-02 |
| 85 | GO:0006508: proteolysis | 3.28E-02 |
| 86 | GO:0048316: seed development | 3.57E-02 |
| 87 | GO:0006810: transport | 3.95E-02 |
| 88 | GO:0005975: carbohydrate metabolic process | 4.11E-02 |
| 89 | GO:0009742: brassinosteroid mediated signaling pathway | 4.14E-02 |
| 90 | GO:0035556: intracellular signal transduction | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005048: signal sequence binding | 0.00E+00 |
| 2 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 3 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 4 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 5 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.44E-05 |
| 6 | GO:0004856: xylulokinase activity | 1.14E-04 |
| 7 | GO:0080062: cytokinin 9-beta-glucosyltransferase activity | 1.14E-04 |
| 8 | GO:0005080: protein kinase C binding | 1.14E-04 |
| 9 | GO:0004163: diphosphomevalonate decarboxylase activity | 1.14E-04 |
| 10 | GO:0050139: nicotinate-N-glucosyltransferase activity | 1.14E-04 |
| 11 | GO:0047807: cytokinin 7-beta-glucosyltransferase activity | 1.14E-04 |
| 12 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.14E-04 |
| 13 | GO:0042586: peptide deformylase activity | 1.14E-04 |
| 14 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.14E-04 |
| 15 | GO:0003839: gamma-glutamylcyclotransferase activity | 2.65E-04 |
| 16 | GO:0005528: FK506 binding | 3.83E-04 |
| 17 | GO:0004176: ATP-dependent peptidase activity | 4.64E-04 |
| 18 | GO:0043023: ribosomal large subunit binding | 6.29E-04 |
| 19 | GO:0001872: (1->3)-beta-D-glucan binding | 6.29E-04 |
| 20 | GO:0016851: magnesium chelatase activity | 6.29E-04 |
| 21 | GO:0004659: prenyltransferase activity | 8.35E-04 |
| 22 | GO:0004045: aminoacyl-tRNA hydrolase activity | 8.35E-04 |
| 23 | GO:0043495: protein anchor | 8.35E-04 |
| 24 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.05E-03 |
| 25 | GO:0004040: amidase activity | 1.05E-03 |
| 26 | GO:0008237: metallopeptidase activity | 1.17E-03 |
| 27 | GO:0031177: phosphopantetheine binding | 1.29E-03 |
| 28 | GO:0016688: L-ascorbate peroxidase activity | 1.29E-03 |
| 29 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.29E-03 |
| 30 | GO:0004130: cytochrome-c peroxidase activity | 1.29E-03 |
| 31 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.29E-03 |
| 32 | GO:0000035: acyl binding | 1.54E-03 |
| 33 | GO:0004124: cysteine synthase activity | 1.54E-03 |
| 34 | GO:0015631: tubulin binding | 1.54E-03 |
| 35 | GO:0019899: enzyme binding | 1.81E-03 |
| 36 | GO:0008312: 7S RNA binding | 2.09E-03 |
| 37 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 2.09E-03 |
| 38 | GO:0016788: hydrolase activity, acting on ester bonds | 2.31E-03 |
| 39 | GO:0015020: glucuronosyltransferase activity | 3.36E-03 |
| 40 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.43E-03 |
| 41 | GO:0009982: pseudouridine synthase activity | 4.43E-03 |
| 42 | GO:0004565: beta-galactosidase activity | 4.43E-03 |
| 43 | GO:0005525: GTP binding | 4.46E-03 |
| 44 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.76E-03 |
| 45 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.76E-03 |
| 46 | GO:0003714: transcription corepressor activity | 6.03E-03 |
| 47 | GO:0043424: protein histidine kinase binding | 6.45E-03 |
| 48 | GO:0003723: RNA binding | 6.73E-03 |
| 49 | GO:0004707: MAP kinase activity | 6.89E-03 |
| 50 | GO:0005215: transporter activity | 7.11E-03 |
| 51 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 7.34E-03 |
| 52 | GO:0022891: substrate-specific transmembrane transporter activity | 7.79E-03 |
| 53 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 8.39E-03 |
| 54 | GO:0008194: UDP-glycosyltransferase activity | 1.01E-02 |
| 55 | GO:0010181: FMN binding | 1.02E-02 |
| 56 | GO:0003729: mRNA binding | 1.12E-02 |
| 57 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.13E-02 |
| 58 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.15E-02 |
| 59 | GO:0004518: nuclease activity | 1.18E-02 |
| 60 | GO:0000156: phosphorelay response regulator activity | 1.24E-02 |
| 61 | GO:0000287: magnesium ion binding | 1.37E-02 |
| 62 | GO:0016597: amino acid binding | 1.40E-02 |
| 63 | GO:0016168: chlorophyll binding | 1.52E-02 |
| 64 | GO:0008375: acetylglucosaminyltransferase activity | 1.58E-02 |
| 65 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.64E-02 |
| 66 | GO:0030247: polysaccharide binding | 1.64E-02 |
| 67 | GO:0008236: serine-type peptidase activity | 1.70E-02 |
| 68 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.77E-02 |
| 69 | GO:0005096: GTPase activator activity | 1.83E-02 |
| 70 | GO:0052689: carboxylic ester hydrolase activity | 1.92E-02 |
| 71 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.29E-02 |
| 72 | GO:0003924: GTPase activity | 2.56E-02 |
| 73 | GO:0016491: oxidoreductase activity | 3.45E-02 |
| 74 | GO:0016757: transferase activity, transferring glycosyl groups | 3.80E-02 |
| 75 | GO:0016887: ATPase activity | 3.96E-02 |
| 76 | GO:0051082: unfolded protein binding | 3.98E-02 |
| 77 | GO:0008026: ATP-dependent helicase activity | 4.14E-02 |
| 78 | GO:0016758: transferase activity, transferring hexosyl groups | 4.58E-02 |
| 79 | GO:0019843: rRNA binding | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.12E-22 |
| 2 | GO:0009570: chloroplast stroma | 1.48E-11 |
| 3 | GO:0009941: chloroplast envelope | 1.30E-07 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 2.18E-07 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 6.02E-06 |
| 6 | GO:0009579: thylakoid | 1.18E-05 |
| 7 | GO:0009534: chloroplast thylakoid | 1.22E-05 |
| 8 | GO:0009515: granal stacked thylakoid | 1.14E-04 |
| 9 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.14E-04 |
| 10 | GO:0080085: signal recognition particle, chloroplast targeting | 2.65E-04 |
| 11 | GO:0010007: magnesium chelatase complex | 4.38E-04 |
| 12 | GO:0009509: chromoplast | 4.38E-04 |
| 13 | GO:0009533: chloroplast stromal thylakoid | 1.81E-03 |
| 14 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.39E-03 |
| 15 | GO:0031977: thylakoid lumen | 2.52E-03 |
| 16 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.70E-03 |
| 17 | GO:0032040: small-subunit processome | 4.06E-03 |
| 18 | GO:0009706: chloroplast inner membrane | 5.21E-03 |
| 19 | GO:0042651: thylakoid membrane | 6.45E-03 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 6.45E-03 |
| 21 | GO:0009532: plastid stroma | 6.89E-03 |
| 22 | GO:0009536: plastid | 8.32E-03 |
| 23 | GO:0009523: photosystem II | 1.08E-02 |
| 24 | GO:0019898: extrinsic component of membrane | 1.08E-02 |
| 25 | GO:0030529: intracellular ribonucleoprotein complex | 1.46E-02 |
| 26 | GO:0031969: chloroplast membrane | 1.74E-02 |
| 27 | GO:0043231: intracellular membrane-bounded organelle | 2.83E-02 |
| 28 | GO:0000139: Golgi membrane | 3.58E-02 |
| 29 | GO:0048046: apoplast | 4.18E-02 |
| 30 | GO:0005623: cell | 4.75E-02 |