GO Enrichment Analysis of Co-expressed Genes with
AT1G06190
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 2 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 3 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 4 | GO:0042407: cristae formation | 0.00E+00 |
| 5 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 6 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 7 | GO:0060416: response to growth hormone | 0.00E+00 |
| 8 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 9 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 10 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 11 | GO:0009658: chloroplast organization | 3.71E-07 |
| 12 | GO:0009793: embryo development ending in seed dormancy | 9.63E-06 |
| 13 | GO:0006418: tRNA aminoacylation for protein translation | 2.58E-05 |
| 14 | GO:0032543: mitochondrial translation | 2.73E-05 |
| 15 | GO:0006655: phosphatidylglycerol biosynthetic process | 4.09E-05 |
| 16 | GO:0006353: DNA-templated transcription, termination | 9.94E-05 |
| 17 | GO:0032544: plastid translation | 1.25E-04 |
| 18 | GO:0006434: seryl-tRNA aminoacylation | 1.44E-04 |
| 19 | GO:0006438: valyl-tRNA aminoacylation | 1.44E-04 |
| 20 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.44E-04 |
| 21 | GO:1903409: reactive oxygen species biosynthetic process | 1.44E-04 |
| 22 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 1.44E-04 |
| 23 | GO:0006426: glycyl-tRNA aminoacylation | 1.44E-04 |
| 24 | GO:0042371: vitamin K biosynthetic process | 1.44E-04 |
| 25 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.44E-04 |
| 26 | GO:0034337: RNA folding | 1.44E-04 |
| 27 | GO:0010027: thylakoid membrane organization | 1.56E-04 |
| 28 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.93E-04 |
| 29 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.29E-04 |
| 30 | GO:0043039: tRNA aminoacylation | 3.29E-04 |
| 31 | GO:0006423: cysteinyl-tRNA aminoacylation | 3.29E-04 |
| 32 | GO:0018026: peptidyl-lysine monomethylation | 3.29E-04 |
| 33 | GO:0080148: negative regulation of response to water deprivation | 3.29E-04 |
| 34 | GO:0008616: queuosine biosynthetic process | 3.29E-04 |
| 35 | GO:0010020: chloroplast fission | 3.77E-04 |
| 36 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 5.40E-04 |
| 37 | GO:0006954: inflammatory response | 5.40E-04 |
| 38 | GO:0042254: ribosome biogenesis | 5.93E-04 |
| 39 | GO:0016556: mRNA modification | 7.73E-04 |
| 40 | GO:0006424: glutamyl-tRNA aminoacylation | 7.73E-04 |
| 41 | GO:0046739: transport of virus in multicellular host | 7.73E-04 |
| 42 | GO:0010371: regulation of gibberellin biosynthetic process | 7.73E-04 |
| 43 | GO:0016117: carotenoid biosynthetic process | 8.77E-04 |
| 44 | GO:0015979: photosynthesis | 9.73E-04 |
| 45 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.02E-03 |
| 46 | GO:0006749: glutathione metabolic process | 1.02E-03 |
| 47 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.02E-03 |
| 48 | GO:0006808: regulation of nitrogen utilization | 1.02E-03 |
| 49 | GO:0045487: gibberellin catabolic process | 1.29E-03 |
| 50 | GO:0000304: response to singlet oxygen | 1.29E-03 |
| 51 | GO:0010236: plastoquinone biosynthetic process | 1.29E-03 |
| 52 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.29E-03 |
| 53 | GO:0016123: xanthophyll biosynthetic process | 1.29E-03 |
| 54 | GO:0009790: embryo development | 1.58E-03 |
| 55 | GO:0042793: transcription from plastid promoter | 1.59E-03 |
| 56 | GO:0010190: cytochrome b6f complex assembly | 1.59E-03 |
| 57 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.59E-03 |
| 58 | GO:0006633: fatty acid biosynthetic process | 1.73E-03 |
| 59 | GO:1901259: chloroplast rRNA processing | 1.91E-03 |
| 60 | GO:0042372: phylloquinone biosynthetic process | 1.91E-03 |
| 61 | GO:0010019: chloroplast-nucleus signaling pathway | 1.91E-03 |
| 62 | GO:0015995: chlorophyll biosynthetic process | 2.09E-03 |
| 63 | GO:0009772: photosynthetic electron transport in photosystem II | 2.24E-03 |
| 64 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.24E-03 |
| 65 | GO:0045995: regulation of embryonic development | 2.24E-03 |
| 66 | GO:0009395: phospholipid catabolic process | 2.24E-03 |
| 67 | GO:0009817: defense response to fungus, incompatible interaction | 2.31E-03 |
| 68 | GO:0048481: plant ovule development | 2.31E-03 |
| 69 | GO:0048564: photosystem I assembly | 2.60E-03 |
| 70 | GO:0042255: ribosome assembly | 2.60E-03 |
| 71 | GO:0009704: de-etiolation | 2.60E-03 |
| 72 | GO:0016559: peroxisome fission | 2.60E-03 |
| 73 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.96E-03 |
| 74 | GO:0017004: cytochrome complex assembly | 2.96E-03 |
| 75 | GO:0048589: developmental growth | 3.35E-03 |
| 76 | GO:0043067: regulation of programmed cell death | 3.76E-03 |
| 77 | GO:0006415: translational termination | 4.61E-03 |
| 78 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.61E-03 |
| 79 | GO:0009073: aromatic amino acid family biosynthetic process | 4.61E-03 |
| 80 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.61E-03 |
| 81 | GO:0006412: translation | 5.70E-03 |
| 82 | GO:0007010: cytoskeleton organization | 7.52E-03 |
| 83 | GO:0008152: metabolic process | 8.26E-03 |
| 84 | GO:0031408: oxylipin biosynthetic process | 8.61E-03 |
| 85 | GO:0016114: terpenoid biosynthetic process | 8.61E-03 |
| 86 | GO:0016998: cell wall macromolecule catabolic process | 8.61E-03 |
| 87 | GO:0007005: mitochondrion organization | 9.17E-03 |
| 88 | GO:0008033: tRNA processing | 1.16E-02 |
| 89 | GO:0000413: protein peptidyl-prolyl isomerization | 1.16E-02 |
| 90 | GO:0040008: regulation of growth | 1.19E-02 |
| 91 | GO:0010197: polar nucleus fusion | 1.22E-02 |
| 92 | GO:0008654: phospholipid biosynthetic process | 1.35E-02 |
| 93 | GO:0032502: developmental process | 1.48E-02 |
| 94 | GO:0016125: sterol metabolic process | 1.62E-02 |
| 95 | GO:0016126: sterol biosynthetic process | 1.84E-02 |
| 96 | GO:0010411: xyloglucan metabolic process | 2.06E-02 |
| 97 | GO:0018298: protein-chromophore linkage | 2.22E-02 |
| 98 | GO:0048767: root hair elongation | 2.30E-02 |
| 99 | GO:0009407: toxin catabolic process | 2.38E-02 |
| 100 | GO:0048527: lateral root development | 2.46E-02 |
| 101 | GO:0045454: cell redox homeostasis | 2.87E-02 |
| 102 | GO:0051707: response to other organism | 3.15E-02 |
| 103 | GO:0042546: cell wall biogenesis | 3.23E-02 |
| 104 | GO:0009636: response to toxic substance | 3.42E-02 |
| 105 | GO:0006364: rRNA processing | 3.89E-02 |
| 106 | GO:0006813: potassium ion transport | 3.89E-02 |
| 107 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.98E-02 |
| 108 | GO:0006096: glycolytic process | 4.38E-02 |
| 109 | GO:0042545: cell wall modification | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 2 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 3 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 4 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 5 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 6 | GO:0004496: mevalonate kinase activity | 0.00E+00 |
| 7 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 8 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 9 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 10 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 11 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 12 | GO:0005048: signal sequence binding | 0.00E+00 |
| 13 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 14 | GO:0070402: NADPH binding | 3.82E-06 |
| 15 | GO:0019843: rRNA binding | 1.33E-05 |
| 16 | GO:0004812: aminoacyl-tRNA ligase activity | 5.21E-05 |
| 17 | GO:0004560: alpha-L-fucosidase activity | 1.44E-04 |
| 18 | GO:0001530: lipopolysaccharide binding | 1.44E-04 |
| 19 | GO:0004828: serine-tRNA ligase activity | 1.44E-04 |
| 20 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 1.44E-04 |
| 21 | GO:0004832: valine-tRNA ligase activity | 1.44E-04 |
| 22 | GO:0004830: tryptophan-tRNA ligase activity | 1.44E-04 |
| 23 | GO:0004820: glycine-tRNA ligase activity | 1.44E-04 |
| 24 | GO:0004817: cysteine-tRNA ligase activity | 3.29E-04 |
| 25 | GO:0008479: queuine tRNA-ribosyltransferase activity | 3.29E-04 |
| 26 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 3.29E-04 |
| 27 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.29E-04 |
| 28 | GO:0017150: tRNA dihydrouridine synthase activity | 5.40E-04 |
| 29 | GO:0003913: DNA photolyase activity | 5.40E-04 |
| 30 | GO:0002161: aminoacyl-tRNA editing activity | 5.40E-04 |
| 31 | GO:0004148: dihydrolipoyl dehydrogenase activity | 5.40E-04 |
| 32 | GO:0004176: ATP-dependent peptidase activity | 6.31E-04 |
| 33 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 7.73E-04 |
| 34 | GO:0009041: uridylate kinase activity | 7.73E-04 |
| 35 | GO:0016851: magnesium chelatase activity | 7.73E-04 |
| 36 | GO:0016149: translation release factor activity, codon specific | 7.73E-04 |
| 37 | GO:0043023: ribosomal large subunit binding | 7.73E-04 |
| 38 | GO:0008097: 5S rRNA binding | 7.73E-04 |
| 39 | GO:0004659: prenyltransferase activity | 1.02E-03 |
| 40 | GO:0016279: protein-lysine N-methyltransferase activity | 1.02E-03 |
| 41 | GO:0004040: amidase activity | 1.29E-03 |
| 42 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.59E-03 |
| 43 | GO:0008237: metallopeptidase activity | 1.59E-03 |
| 44 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.59E-03 |
| 45 | GO:0051920: peroxiredoxin activity | 1.91E-03 |
| 46 | GO:0009881: photoreceptor activity | 2.24E-03 |
| 47 | GO:0008312: 7S RNA binding | 2.60E-03 |
| 48 | GO:0004033: aldo-keto reductase (NADP) activity | 2.60E-03 |
| 49 | GO:0016209: antioxidant activity | 2.60E-03 |
| 50 | GO:0003747: translation release factor activity | 3.35E-03 |
| 51 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.37E-03 |
| 52 | GO:0003723: RNA binding | 5.04E-03 |
| 53 | GO:0031072: heat shock protein binding | 5.52E-03 |
| 54 | GO:0003924: GTPase activity | 7.30E-03 |
| 55 | GO:0043424: protein histidine kinase binding | 8.06E-03 |
| 56 | GO:0008324: cation transmembrane transporter activity | 8.06E-03 |
| 57 | GO:0003735: structural constituent of ribosome | 8.51E-03 |
| 58 | GO:0003727: single-stranded RNA binding | 1.03E-02 |
| 59 | GO:0008080: N-acetyltransferase activity | 1.22E-02 |
| 60 | GO:0003713: transcription coactivator activity | 1.22E-02 |
| 61 | GO:0016887: ATPase activity | 1.27E-02 |
| 62 | GO:0050662: coenzyme binding | 1.28E-02 |
| 63 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.41E-02 |
| 64 | GO:0005524: ATP binding | 1.43E-02 |
| 65 | GO:0005200: structural constituent of cytoskeleton | 1.69E-02 |
| 66 | GO:0003729: mRNA binding | 1.81E-02 |
| 67 | GO:0000287: magnesium ion binding | 1.89E-02 |
| 68 | GO:0016740: transferase activity | 1.95E-02 |
| 69 | GO:0016788: hydrolase activity, acting on ester bonds | 1.97E-02 |
| 70 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.06E-02 |
| 71 | GO:0008236: serine-type peptidase activity | 2.14E-02 |
| 72 | GO:0005507: copper ion binding | 2.36E-02 |
| 73 | GO:0004222: metalloendopeptidase activity | 2.38E-02 |
| 74 | GO:0003746: translation elongation factor activity | 2.63E-02 |
| 75 | GO:0003993: acid phosphatase activity | 2.71E-02 |
| 76 | GO:0005525: GTP binding | 2.83E-02 |
| 77 | GO:0004364: glutathione transferase activity | 3.06E-02 |
| 78 | GO:0004185: serine-type carboxypeptidase activity | 3.15E-02 |
| 79 | GO:0004519: endonuclease activity | 3.83E-02 |
| 80 | GO:0003690: double-stranded DNA binding | 3.98E-02 |
| 81 | GO:0045330: aspartyl esterase activity | 4.18E-02 |
| 82 | GO:0030599: pectinesterase activity | 4.78E-02 |
| 83 | GO:0008289: lipid binding | 4.89E-02 |
| 84 | GO:0051082: unfolded protein binding | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.53E-40 |
| 4 | GO:0009570: chloroplast stroma | 7.43E-25 |
| 5 | GO:0009941: chloroplast envelope | 2.50E-19 |
| 6 | GO:0009579: thylakoid | 3.39E-06 |
| 7 | GO:0009536: plastid | 4.18E-05 |
| 8 | GO:0031969: chloroplast membrane | 1.21E-04 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 1.70E-04 |
| 10 | GO:0009535: chloroplast thylakoid membrane | 2.44E-04 |
| 11 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.29E-04 |
| 12 | GO:0080085: signal recognition particle, chloroplast targeting | 3.29E-04 |
| 13 | GO:0009508: plastid chromosome | 3.34E-04 |
| 14 | GO:0031977: thylakoid lumen | 3.92E-04 |
| 15 | GO:0010007: magnesium chelatase complex | 5.40E-04 |
| 16 | GO:0005840: ribosome | 7.01E-04 |
| 17 | GO:0009295: nucleoid | 1.59E-03 |
| 18 | GO:0009533: chloroplast stromal thylakoid | 2.24E-03 |
| 19 | GO:0009707: chloroplast outer membrane | 2.31E-03 |
| 20 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.96E-03 |
| 21 | GO:0009534: chloroplast thylakoid | 4.55E-03 |
| 22 | GO:0032040: small-subunit processome | 5.06E-03 |
| 23 | GO:0000311: plastid large ribosomal subunit | 5.06E-03 |
| 24 | GO:0043234: protein complex | 7.00E-03 |
| 25 | GO:0009706: chloroplast inner membrane | 7.18E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 8.06E-03 |
| 27 | GO:0042651: thylakoid membrane | 8.06E-03 |
| 28 | GO:0005739: mitochondrion | 1.11E-02 |
| 29 | GO:0019898: extrinsic component of membrane | 1.35E-02 |
| 30 | GO:0015934: large ribosomal subunit | 2.46E-02 |
| 31 | GO:0005856: cytoskeleton | 3.42E-02 |
| 32 | GO:0043231: intracellular membrane-bounded organelle | 3.89E-02 |
| 33 | GO:0009505: plant-type cell wall | 4.82E-02 |