co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G05190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0034337: RNA folding	0.00E+00
2	GO:0002184: cytoplasmic translational termination	0.00E+00
3	GO:0005996: monosaccharide metabolic process	0.00E+00
4	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
5	GO:0016553: base conversion or substitution editing	0.00E+00
6	GO:0015995: chlorophyll biosynthetic process	9.09E-11
7	GO:0015979: photosynthesis	6.47E-08
8	GO:0055114: oxidation-reduction process	6.59E-07
9	GO:0030388: fructose 1,6-bisphosphate metabolic process	9.95E-07
10	GO:0006000: fructose metabolic process	3.72E-06
11	GO:0006094: gluconeogenesis	9.75E-06
12	GO:0010021: amylopectin biosynthetic process	1.63E-05
13	GO:0009854: oxidative photosynthetic carbon pathway	5.62E-05
14	GO:0019252: starch biosynthetic process	7.99E-05
15	GO:0009704: de-etiolation	9.72E-05
16	GO:0009735: response to cytokinin	1.09E-04
17	GO:0006002: fructose 6-phosphate metabolic process	1.22E-04
18	GO:0032544: plastid translation	1.22E-04
19	GO:1904964: positive regulation of phytol biosynthetic process	1.42E-04
20	GO:0065002: intracellular protein transmembrane transport	1.42E-04
21	GO:0043686: co-translational protein modification	1.42E-04
22	GO:0043953: protein transport by the Tat complex	1.42E-04
23	GO:0071277: cellular response to calcium ion	1.42E-04
24	GO:0009090: homoserine biosynthetic process	1.42E-04
25	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	1.42E-04
26	GO:0043489: RNA stabilization	1.42E-04
27	GO:1904966: positive regulation of vitamin E biosynthetic process	1.42E-04
28	GO:0000481: maturation of 5S rRNA	1.42E-04
29	GO:0006783: heme biosynthetic process	1.50E-04
30	GO:0010027: thylakoid membrane organization	1.52E-04
31	GO:0006779: porphyrin-containing compound biosynthetic process	1.80E-04
32	GO:0006782: protoporphyrinogen IX biosynthetic process	2.13E-04
33	GO:0009773: photosynthetic electron transport in photosystem I	2.49E-04
34	GO:0009853: photorespiration	3.05E-04
35	GO:1902326: positive regulation of chlorophyll biosynthetic process	3.25E-04
36	GO:0005986: sucrose biosynthetic process	3.27E-04
37	GO:0019253: reductive pentose-phosphate cycle	3.70E-04
38	GO:0034051: negative regulation of plant-type hypersensitive response	5.33E-04
39	GO:0009067: aspartate family amino acid biosynthetic process	7.63E-04
40	GO:0006020: inositol metabolic process	7.63E-04
41	GO:1901000: regulation of response to salt stress	7.63E-04
42	GO:0009152: purine ribonucleotide biosynthetic process	7.63E-04
43	GO:0046653: tetrahydrofolate metabolic process	7.63E-04
44	GO:0009052: pentose-phosphate shunt, non-oxidative branch	7.63E-04
45	GO:0033014: tetrapyrrole biosynthetic process	7.63E-04
46	GO:0010731: protein glutathionylation	7.63E-04
47	GO:0042631: cellular response to water deprivation	9.27E-04
48	GO:0045727: positive regulation of translation	1.01E-03
49	GO:0010600: regulation of auxin biosynthetic process	1.01E-03
50	GO:0006021: inositol biosynthetic process	1.01E-03
51	GO:0031365: N-terminal protein amino acid modification	1.28E-03
52	GO:0000304: response to singlet oxygen	1.28E-03
53	GO:0006564: L-serine biosynthetic process	1.28E-03
54	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.57E-03
55	GO:0045962: positive regulation of development, heterochronic	1.57E-03
56	GO:0046855: inositol phosphate dephosphorylation	1.57E-03
57	GO:0006796: phosphate-containing compound metabolic process	1.57E-03
58	GO:0006633: fatty acid biosynthetic process	1.69E-03
59	GO:0009088: threonine biosynthetic process	1.88E-03
60	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.88E-03
61	GO:1901259: chloroplast rRNA processing	1.88E-03
62	GO:0010161: red light signaling pathway	2.21E-03
63	GO:0009772: photosynthetic electron transport in photosystem II	2.21E-03
64	GO:0009817: defense response to fungus, incompatible interaction	2.27E-03
65	GO:0042742: defense response to bacterium	2.47E-03
66	GO:2000070: regulation of response to water deprivation	2.56E-03
67	GO:0048564: photosystem I assembly	2.56E-03
68	GO:0010928: regulation of auxin mediated signaling pathway	2.56E-03
69	GO:0005978: glycogen biosynthetic process	2.56E-03
70	GO:0032508: DNA duplex unwinding	2.56E-03
71	GO:0071482: cellular response to light stimulus	2.93E-03
72	GO:0006526: arginine biosynthetic process	2.93E-03
73	GO:0034599: cellular response to oxidative stress	2.99E-03
74	GO:0009658: chloroplast organization	3.30E-03
75	GO:0010206: photosystem II repair	3.31E-03
76	GO:0090333: regulation of stomatal closure	3.31E-03
77	GO:0006754: ATP biosynthetic process	3.31E-03
78	GO:0005982: starch metabolic process	3.71E-03
79	GO:0010205: photoinhibition	3.71E-03
80	GO:0009086: methionine biosynthetic process	3.71E-03
81	GO:0006535: cysteine biosynthetic process from serine	4.12E-03
82	GO:0009636: response to toxic substance	4.13E-03
83	GO:0018119: peptidyl-cysteine S-nitrosylation	4.55E-03
84	GO:0019684: photosynthesis, light reaction	4.55E-03
85	GO:0009089: lysine biosynthetic process via diaminopimelate	4.55E-03
86	GO:0072593: reactive oxygen species metabolic process	4.55E-03
87	GO:0000272: polysaccharide catabolic process	4.55E-03
88	GO:0006790: sulfur compound metabolic process	4.99E-03
89	GO:0018107: peptidyl-threonine phosphorylation	5.45E-03
90	GO:0006412: translation	5.46E-03
91	GO:0009266: response to temperature stimulus	5.92E-03
92	GO:0010207: photosystem II assembly	5.92E-03
93	GO:0046854: phosphatidylinositol phosphorylation	6.41E-03
94	GO:0005985: sucrose metabolic process	6.41E-03
95	GO:0019762: glucosinolate catabolic process	6.91E-03
96	GO:0006636: unsaturated fatty acid biosynthetic process	6.91E-03
97	GO:0019344: cysteine biosynthetic process	7.42E-03
98	GO:0000027: ribosomal large subunit assembly	7.42E-03
99	GO:0006289: nucleotide-excision repair	7.42E-03
100	GO:0010073: meristem maintenance	7.95E-03
101	GO:0061077: chaperone-mediated protein folding	8.49E-03
102	GO:0031408: oxylipin biosynthetic process	8.49E-03
103	GO:0019748: secondary metabolic process	9.05E-03
104	GO:0010017: red or far-red light signaling pathway	9.05E-03
105	GO:0035428: hexose transmembrane transport	9.05E-03
106	GO:0016226: iron-sulfur cluster assembly	9.05E-03
107	GO:0051028: mRNA transport	1.08E-02
108	GO:0046323: glucose import	1.20E-02
109	GO:0006520: cellular amino acid metabolic process	1.20E-02
110	GO:0006662: glycerol ether metabolic process	1.20E-02
111	GO:0015986: ATP synthesis coupled proton transport	1.26E-02
112	GO:0010228: vegetative to reproductive phase transition of meristem	1.28E-02
113	GO:0000302: response to reactive oxygen species	1.39E-02
114	GO:0009409: response to cold	1.53E-02
115	GO:0030163: protein catabolic process	1.53E-02
116	GO:0009567: double fertilization forming a zygote and endosperm	1.60E-02
117	GO:0005975: carbohydrate metabolic process	1.81E-02
118	GO:0042254: ribosome biogenesis	1.93E-02
119	GO:0018298: protein-chromophore linkage	2.19E-02
120	GO:0009407: toxin catabolic process	2.34E-02
121	GO:0009631: cold acclimation	2.42E-02
122	GO:0044550: secondary metabolite biosynthetic process	2.55E-02
123	GO:0045087: innate immune response	2.59E-02
124	GO:0016051: carbohydrate biosynthetic process	2.59E-02
125	GO:0032259: methylation	3.31E-02
126	GO:0009965: leaf morphogenesis	3.37E-02
127	GO:0006397: mRNA processing	3.61E-02
128	GO:0006364: rRNA processing	3.83E-02
129	GO:0009585: red, far-red light phototransduction	3.83E-02
130	GO:0006096: glycolytic process	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
2	GO:0008465: glycerate dehydrogenase activity	0.00E+00
3	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
4	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
5	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
6	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
7	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
8	GO:0008887: glycerate kinase activity	0.00E+00
9	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
10	GO:0008266: poly(U) RNA binding	1.69E-07
11	GO:0019843: rRNA binding	6.16E-07
12	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	9.95E-07
13	GO:0016491: oxidoreductase activity	6.90E-06
14	GO:0016851: magnesium chelatase activity	8.70E-06
15	GO:0005528: FK506 binding	2.11E-05
16	GO:0003959: NADPH dehydrogenase activity	2.66E-05
17	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.37E-05
18	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	1.42E-04
19	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	1.42E-04
20	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	1.42E-04
21	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.42E-04
22	GO:0004325: ferrochelatase activity	1.42E-04
23	GO:0004853: uroporphyrinogen decarboxylase activity	1.42E-04
24	GO:0042586: peptide deformylase activity	1.42E-04
25	GO:0050017: L-3-cyanoalanine synthase activity	3.25E-04
26	GO:0042389: omega-3 fatty acid desaturase activity	3.25E-04
27	GO:0010297: heteropolysaccharide binding	3.25E-04
28	GO:0009977: proton motive force dependent protein transmembrane transporter activity	3.25E-04
29	GO:0004617: phosphoglycerate dehydrogenase activity	3.25E-04
30	GO:0052832: inositol monophosphate 3-phosphatase activity	3.25E-04
31	GO:0033201: alpha-1,4-glucan synthase activity	3.25E-04
32	GO:0008934: inositol monophosphate 1-phosphatase activity	3.25E-04
33	GO:0052833: inositol monophosphate 4-phosphatase activity	3.25E-04
34	GO:0004412: homoserine dehydrogenase activity	3.25E-04
35	GO:0018708: thiol S-methyltransferase activity	3.25E-04
36	GO:0003844: 1,4-alpha-glucan branching enzyme activity	3.25E-04
37	GO:0016630: protochlorophyllide reductase activity	3.25E-04
38	GO:0031072: heat shock protein binding	3.27E-04
39	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	5.33E-04
40	GO:0008864: formyltetrahydrofolate deformylase activity	5.33E-04
41	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	5.33E-04
42	GO:0004324: ferredoxin-NADP+ reductase activity	5.33E-04
43	GO:0043169: cation binding	5.33E-04
44	GO:0004373: glycogen (starch) synthase activity	5.33E-04
45	GO:0004751: ribose-5-phosphate isomerase activity	5.33E-04
46	GO:0051287: NAD binding	5.42E-04
47	GO:0043023: ribosomal large subunit binding	7.63E-04
48	GO:0004072: aspartate kinase activity	7.63E-04
49	GO:0043495: protein anchor	1.01E-03
50	GO:0070628: proteasome binding	1.01E-03
51	GO:0009011: starch synthase activity	1.01E-03
52	GO:0004332: fructose-bisphosphate aldolase activity	1.57E-03
53	GO:0004130: cytochrome-c peroxidase activity	1.57E-03
54	GO:0031593: polyubiquitin binding	1.57E-03
55	GO:0042578: phosphoric ester hydrolase activity	1.57E-03
56	GO:0016462: pyrophosphatase activity	1.57E-03
57	GO:0016597: amino acid binding	1.65E-03
58	GO:0004124: cysteine synthase activity	1.88E-03
59	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.88E-03
60	GO:0004427: inorganic diphosphatase activity	2.21E-03
61	GO:0019899: enzyme binding	2.21E-03
62	GO:0004222: metalloendopeptidase activity	2.50E-03
63	GO:0004033: aldo-keto reductase (NADP) activity	2.56E-03
64	GO:0016887: ATPase activity	2.70E-03
65	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.93E-03
66	GO:0071949: FAD binding	3.31E-03
67	GO:0004364: glutathione transferase activity	3.54E-03
68	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	3.71E-03
69	GO:0030234: enzyme regulator activity	4.12E-03
70	GO:0004565: beta-galactosidase activity	5.45E-03
71	GO:0005507: copper ion binding	5.67E-03
72	GO:0051082: unfolded protein binding	7.04E-03
73	GO:0051536: iron-sulfur cluster binding	7.42E-03
74	GO:0043130: ubiquitin binding	7.42E-03
75	GO:0003735: structural constituent of ribosome	8.22E-03
76	GO:0004176: ATP-dependent peptidase activity	8.49E-03
77	GO:0022891: substrate-specific transmembrane transporter activity	9.62E-03
78	GO:0047134: protein-disulfide reductase activity	1.08E-02
79	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.20E-02
80	GO:0004791: thioredoxin-disulfide reductase activity	1.26E-02
81	GO:0005355: glucose transmembrane transporter activity	1.26E-02
82	GO:0050662: coenzyme binding	1.26E-02
83	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.53E-02
84	GO:0003684: damaged DNA binding	1.60E-02
85	GO:0008237: metallopeptidase activity	1.67E-02
86	GO:0003729: mRNA binding	1.76E-02
87	GO:0008168: methyltransferase activity	1.82E-02
88	GO:0016168: chlorophyll binding	1.88E-02
89	GO:0004601: peroxidase activity	1.89E-02
90	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.11E-02
91	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.42E-02
92	GO:0003746: translation elongation factor activity	2.59E-02
93	GO:0050661: NADP binding	2.84E-02
94	GO:0004185: serine-type carboxypeptidase activity	3.10E-02
95	GO:0003723: RNA binding	3.32E-02
96	GO:0005198: structural molecule activity	3.37E-02
97	GO:0009055: electron carrier activity	3.71E-02
98	GO:0046872: metal ion binding	3.72E-02
99	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.42E-02
100	GO:0004650: polygalacturonase activity	4.62E-02