Gene: AT1G04400
     


Gene description


TAIR ID: AT1G04400

Short description: cryptochrome 2

Pathogen responsiveness: -2.15

General responsiveness: -1.84

Orthologous


Rice:

OS02G0625000   OS02G0573200  

Maize:

GRMZM2G172152  

Wheat: No orthologous gene

GO biological process


response to blue light, chromatin remodeling, regulation of leaf morphogenesis, response to strigolactone, positive regulation of reactive oxygen species metabolic process, covalent chromatin modification, protein-chromophore linkage, defense response to virus, long-day photoperiodism, flowering, response to light stimulus, regulation of photoperiodism, response to low fluence blue light stimulus by blue low-fluence system, regulation of meristem growth, positive regulation of flower development, response to water deprivation, circadian rhythm, blue light signaling pathway, regulation of flower development, flavin adenine dinucleotide metabolic process, response to absence of light, stomatal movement, phototropism, regulation of circadian rhythm, chromatin organization, circadian regulation of calcium ion oscillation


GO cellular component


nuclear body, vacuole, nucleus, cytoplasm, PML body


GO molecular function


protein binding, ATP binding, FAD binding, protein homodimerization activity, blue light photoreceptor activity, identical protein binding


Protein domain


PfamPF00875, DNA photolyase
PfamPF03441, FAD binding domain of DNA photolyase

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G13790, AT2G46830, AT2G38250, AT3G14230, AT1G24260, AT5G10140, AT1G01060

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 10 (Top20%)

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.734.35E-03






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