Gene: AT1G01080
     

Gene description


TAIR ID: AT1G01080

Short description: RNA-binding (RRM/RBD/RNP motifs) family protein

Pathogen responsiveness: 0.22

General responsiveness: 1.71

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


chloroplast envelope, chloroplast, chloroplast stroma, nucleus


GO molecular function


unkown


Protein domain


PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G09290

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


28 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 2 h-1.581.63E-03
GSE17464Penta, controlPenta, Flg22 2 h-1.745.02E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.982.81E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.158.99E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.091.59E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.233.56E-09
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-1.922.32E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.912.34E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.044.41E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.551.47E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.142.17E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.843.09E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.901.64E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.763.52E-09
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.325.77E-10
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.502.23E-14
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.513.49E-06
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.818.56E-09
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.931.13E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.467.23E-14
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-1.592.49E-06
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-1.592.51E-06
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.005.78E-10
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.751.11E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.998.44E-10
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.638.18E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.591.96E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.651.62E-06






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