GO Enrichment Analysis of Co-expressed Genes with
AT1G01080
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 5 | GO:0006412: translation | 6.80E-14 |
| 6 | GO:0032544: plastid translation | 2.35E-10 |
| 7 | GO:0009658: chloroplast organization | 1.09E-06 |
| 8 | GO:0071482: cellular response to light stimulus | 1.66E-05 |
| 9 | GO:0009735: response to cytokinin | 1.70E-05 |
| 10 | GO:0006352: DNA-templated transcription, initiation | 3.76E-05 |
| 11 | GO:0043489: RNA stabilization | 3.90E-05 |
| 12 | GO:0006568: tryptophan metabolic process | 9.72E-05 |
| 13 | GO:2001295: malonyl-CoA biosynthetic process | 1.68E-04 |
| 14 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 2.48E-04 |
| 15 | GO:2001141: regulation of RNA biosynthetic process | 2.48E-04 |
| 16 | GO:0016556: mRNA modification | 2.48E-04 |
| 17 | GO:0006021: inositol biosynthetic process | 3.33E-04 |
| 18 | GO:0071483: cellular response to blue light | 3.33E-04 |
| 19 | GO:0042254: ribosome biogenesis | 3.95E-04 |
| 20 | GO:0015995: chlorophyll biosynthetic process | 3.97E-04 |
| 21 | GO:0000304: response to singlet oxygen | 4.25E-04 |
| 22 | GO:0000470: maturation of LSU-rRNA | 5.22E-04 |
| 23 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 6.22E-04 |
| 24 | GO:0000105: histidine biosynthetic process | 8.37E-04 |
| 25 | GO:0042255: ribosome assembly | 8.37E-04 |
| 26 | GO:0006353: DNA-templated transcription, termination | 8.37E-04 |
| 27 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.19E-03 |
| 28 | GO:0045036: protein targeting to chloroplast | 1.31E-03 |
| 29 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.31E-03 |
| 30 | GO:0009073: aromatic amino acid family biosynthetic process | 1.44E-03 |
| 31 | GO:0006790: sulfur compound metabolic process | 1.58E-03 |
| 32 | GO:0010020: chloroplast fission | 1.86E-03 |
| 33 | GO:0090351: seedling development | 2.01E-03 |
| 34 | GO:0046854: phosphatidylinositol phosphorylation | 2.01E-03 |
| 35 | GO:0006633: fatty acid biosynthetic process | 2.03E-03 |
| 36 | GO:0031408: oxylipin biosynthetic process | 2.64E-03 |
| 37 | GO:0008033: tRNA processing | 3.50E-03 |
| 38 | GO:0016032: viral process | 4.45E-03 |
| 39 | GO:0032502: developmental process | 4.45E-03 |
| 40 | GO:0009817: defense response to fungus, incompatible interaction | 6.58E-03 |
| 41 | GO:0009631: cold acclimation | 7.27E-03 |
| 42 | GO:0045087: innate immune response | 7.75E-03 |
| 43 | GO:0009637: response to blue light | 7.75E-03 |
| 44 | GO:0030001: metal ion transport | 8.48E-03 |
| 45 | GO:0006839: mitochondrial transport | 8.48E-03 |
| 46 | GO:0010114: response to red light | 9.25E-03 |
| 47 | GO:0006457: protein folding | 1.43E-02 |
| 48 | GO:0006396: RNA processing | 1.49E-02 |
| 49 | GO:0009790: embryo development | 1.91E-02 |
| 50 | GO:0006413: translational initiation | 2.05E-02 |
| 51 | GO:0009451: RNA modification | 2.19E-02 |
| 52 | GO:0008380: RNA splicing | 2.45E-02 |
| 53 | GO:0009409: response to cold | 3.04E-02 |
| 54 | GO:0048366: leaf development | 3.31E-02 |
| 55 | GO:0080167: response to karrikin | 3.43E-02 |
| 56 | GO:0006629: lipid metabolic process | 4.53E-02 |
| 57 | GO:0006397: mRNA processing | 4.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052834: inositol monophosphate phosphatase activity | 0.00E+00 |
| 2 | GO:0004401: histidinol-phosphatase activity | 0.00E+00 |
| 3 | GO:0019843: rRNA binding | 5.36E-17 |
| 4 | GO:0003735: structural constituent of ribosome | 7.21E-14 |
| 5 | GO:0001053: plastid sigma factor activity | 1.81E-06 |
| 6 | GO:0016987: sigma factor activity | 1.81E-06 |
| 7 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 3.90E-05 |
| 8 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 3.90E-05 |
| 9 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 3.90E-05 |
| 10 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 3.90E-05 |
| 11 | GO:0008266: poly(U) RNA binding | 5.95E-05 |
| 12 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 9.72E-05 |
| 13 | GO:0052832: inositol monophosphate 3-phosphatase activity | 9.72E-05 |
| 14 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 9.72E-05 |
| 15 | GO:0008934: inositol monophosphate 1-phosphatase activity | 9.72E-05 |
| 16 | GO:0052833: inositol monophosphate 4-phosphatase activity | 9.72E-05 |
| 17 | GO:0004075: biotin carboxylase activity | 1.68E-04 |
| 18 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 1.68E-04 |
| 19 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 1.68E-04 |
| 20 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.68E-04 |
| 21 | GO:0043023: ribosomal large subunit binding | 2.48E-04 |
| 22 | GO:0008097: 5S rRNA binding | 2.48E-04 |
| 23 | GO:0003723: RNA binding | 2.70E-04 |
| 24 | GO:0016836: hydro-lyase activity | 3.33E-04 |
| 25 | GO:0003989: acetyl-CoA carboxylase activity | 4.25E-04 |
| 26 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 6.22E-04 |
| 27 | GO:0016831: carboxy-lyase activity | 7.28E-04 |
| 28 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.36E-04 |
| 29 | GO:0047617: acyl-CoA hydrolase activity | 1.19E-03 |
| 30 | GO:0003727: single-stranded RNA binding | 3.15E-03 |
| 31 | GO:0050662: coenzyme binding | 3.87E-03 |
| 32 | GO:0008483: transaminase activity | 5.05E-03 |
| 33 | GO:0008236: serine-type peptidase activity | 6.35E-03 |
| 34 | GO:0003746: translation elongation factor activity | 7.75E-03 |
| 35 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.03E-02 |
| 36 | GO:0003690: double-stranded DNA binding | 1.17E-02 |
| 37 | GO:0051082: unfolded protein binding | 1.46E-02 |
| 38 | GO:0030170: pyridoxal phosphate binding | 1.85E-02 |
| 39 | GO:0003743: translation initiation factor activity | 2.41E-02 |
| 40 | GO:0000287: magnesium ion binding | 2.90E-02 |
| 41 | GO:0004601: peroxidase activity | 2.94E-02 |
| 42 | GO:0016788: hydrolase activity, acting on ester bonds | 2.98E-02 |
| 43 | GO:0003729: mRNA binding | 3.34E-02 |
| 44 | GO:0052689: carboxylic ester hydrolase activity | 3.68E-02 |
| 45 | GO:0042803: protein homodimerization activity | 4.03E-02 |
| 46 | GO:0004519: endonuclease activity | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.27E-30 |
| 2 | GO:0009941: chloroplast envelope | 8.08E-30 |
| 3 | GO:0009570: chloroplast stroma | 1.91E-26 |
| 4 | GO:0005840: ribosome | 4.72E-14 |
| 5 | GO:0009579: thylakoid | 2.86E-12 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 6.12E-07 |
| 7 | GO:0009547: plastid ribosome | 3.90E-05 |
| 8 | GO:0000312: plastid small ribosomal subunit | 5.95E-05 |
| 9 | GO:0009536: plastid | 1.54E-04 |
| 10 | GO:0009534: chloroplast thylakoid | 3.20E-04 |
| 11 | GO:0015934: large ribosomal subunit | 5.06E-04 |
| 12 | GO:0022625: cytosolic large ribosomal subunit | 5.40E-04 |
| 13 | GO:0000311: plastid large ribosomal subunit | 1.58E-03 |
| 14 | GO:0009543: chloroplast thylakoid lumen | 1.63E-03 |
| 15 | GO:0043234: protein complex | 2.16E-03 |
| 16 | GO:0016020: membrane | 2.41E-03 |
| 17 | GO:0042651: thylakoid membrane | 2.48E-03 |
| 18 | GO:0015935: small ribosomal subunit | 2.64E-03 |
| 19 | GO:0009532: plastid stroma | 2.64E-03 |
| 20 | GO:0022627: cytosolic small ribosomal subunit | 2.93E-03 |
| 21 | GO:0031969: chloroplast membrane | 4.23E-03 |
| 22 | GO:0009295: nucleoid | 5.05E-03 |
| 23 | GO:0030529: intracellular ribonucleoprotein complex | 5.47E-03 |
| 24 | GO:0031977: thylakoid lumen | 8.74E-03 |
| 25 | GO:0022626: cytosolic ribosome | 1.06E-02 |
| 26 | GO:0009706: chloroplast inner membrane | 1.46E-02 |
| 27 | GO:0005623: cell | 1.75E-02 |
| 28 | GO:0005743: mitochondrial inner membrane | 4.30E-02 |
| 29 | GO:0043231: intracellular membrane-bounded organelle | 4.85E-02 |