Gene: OS08G0242800
     

Gene description


RAP-DB: OS08G0242800


Short description: Similar to Sigma factor SIG6.

Orthologous


Arabidopsis:

AT2G36990  

Maize:

GRMZM2G144196  

Wheat: No orthologous

GO biological process


transcription initiation, DNA-dependent (GO:0006352), regulation of transcription, DNA-dependent (GO:0006355)

GO cellular component


unknown

GO molecular function


DNA binding (GO:0003677), sequence-specific DNA binding transcription factor activity (GO:0003700), sigma factor activity (GO:0016987)

Protein domain


PfamPF04545, Sigma-70, region 4
PfamPF04542, Sigma-70 region 2
PfamPF04539, Sigma-70 region 3

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Differentially expressed condition


13 conditions


SeriesControlTreatmentLog2FCAdj. P value
GSE36272IR24, MOCKIR24, Xanthomonas oryzae strain PXO86-1.943.59E-04
GSE36272IR24, MOCKIR24, Xanthomonas oryzae strain _PXO99A-3.144.18E-08
GSE36272IR24, MOCKIR24, Xanthomonas oryzae strain PXO99AME1-2.204.21E-05
GSE36272IR24, MOCKIR24, Xanthomonas oryzae strain PXO99AME2-1.721.41E-03
GSE36272IR24, MOCKIR24, Xanthomonas oryzae strain PXO99AME5-2.872.70E-07
GSE36272IR24, MOCKIR24, Xanthomonas oryzae strain PXO99A_2-3.271.72E-08
GSE36272IR24, MOCKIR24, Xanthomonas oryzae strain T7174-1.944.60E-04
GSE36272Nipponbare, MOCKNipponbare, Xanthomonas oryzae strain PXO99AME2-1.641.74E-03
GSE36272Nipponbare, MOCKNipponbare, Xanthomonas oryzae strain PXO99A_2-1.747.67E-04
GSE36272Nipponbare, MOCKNipponbare, Xanthomonas oryzae strain T7174-1.602.02E-03
GSE62894Nipponbare, pish, water 5 dNipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d-4.752.97E-08
GSE63047Nipponbare, water 7 dNipponbare, Xanthomonas oryzae T7174R 7 d-4.695.19E-16
GSE7256Nipponbare, Mock 4 dNipponbare, Magnaporthe grisea FR13 5 d-1.807.53E-04






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