Maize: GRMZM2G144196
     

Gene description


maizeGDB: GRMZM2G144196


Short description: RNApolymerase sigma-subunit F


Orthologous


Arabidopsis:

AT2G36990  

Rice:

OS08G0242800  

Wheat: No orthologous

GO biological process


DNA-templated transcription, initiation, regulation of transcription, DNA-templated, chloroplast relocation, leaf morphogenesis, thylakoid membrane organization, carotenoid biosynthetic process, isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway, cell differentiation, ncRNA metabolic process, positive regulation of transcription, DNA-templated, cellular response to light stimulus, seedling development

GO cellular component


chloroplast, plastid

GO molecular function


plastid sigma factor activity, DNA binding, transcription factor activity, sequence-specific DNA binding, sigma factor activity

Protein domain


PfamPF04539, Sigma-70 region 3
PfamPF04542, Sigma-70 region 2
PfamPF04545, Sigma-70, region 4

Metabolic pathway


Not involved in metabolic pathway


Differentially expressed condition


10 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE10023Mock, 4.5 dSG200, 4.5 d-3.341.18E-15
GSE10023Mock, 4 dSG200, 4 d-1.993.55E-10
GSE10023Mock, 8 dSG200, 8 d-1.607.37E-09
GSE19559Mock, 4 dSG200, 4 d-1.991.07E-04
GSE19559Mock, 4 dSG200_fox1, 4 d-1.891.50E-04
GSE48406Mock, 4 dSG200Dtin1, 4 d-1.962.89E-08
GSE48406Mock, 4 dSG200Dtin3, 4 d-1.681.49E-07
GSE48406Mock, 4 dSG200Dtin5, 4 d-1.703.14E-07
GSE48406Mock, 4 dSG200, 4 d-1.993.04E-08
GSE48536Mock, 4 dSG200, 4 d-1.793.40E-06






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