Gene: AT5G65640
     

Gene description


TAIR ID: AT5G65640

Short description: beta HLH protein 93

Pathogen responsiveness: -0.03

General responsiveness: 1.32

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G173372  

Wheat: No orthologous gene

GO biological process


regulation of gibberellin biosynthetic process, regulation of transcription, DNA-templated, gibberellin catabolic process, multicellular organism development, transcription


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, DNA binding, protein dimerization activity


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G51600

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


19 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.561.34E-05
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h-1.702.36E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.985.81E-03
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.602.26E-02
GSE17464Laer, controlLaer, PstDC3000 12 h-1.761.24E-02
GSE17464Laer, controlLaer, Flg22 1 h-2.422.97E-04
GSE17464Laer, controlLaer, Flg22 2 h-2.804.73E-05
GSE17464Penta, controlPenta, PstDC3000 12 h-1.641.65E-02
GSE17464Penta, controlPenta, Flg22 2 h-1.701.14E-02
GSE17464Penta, controlPenta, Flg22 2 h-1.551.88E-02
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.501.82E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.921.96E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.832.57E-10
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-2.221.05E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-2.002.63E-05
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-2.111.90E-05
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-2.584.59E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-2.712.13E-09
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h2.211.25E-07






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