GO Enrichment Analysis of Co-expressed Genes with
AT5G65640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 2 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 3 | GO:0042425: choline biosynthetic process | 0.00E+00 |
| 4 | GO:0016998: cell wall macromolecule catabolic process | 2.47E-05 |
| 5 | GO:0071258: cellular response to gravity | 3.03E-04 |
| 6 | GO:0010024: phytochromobilin biosynthetic process | 3.03E-04 |
| 7 | GO:0045717: negative regulation of fatty acid biosynthetic process | 3.03E-04 |
| 8 | GO:0010020: chloroplast fission | 3.34E-04 |
| 9 | GO:0007010: cytoskeleton organization | 4.64E-04 |
| 10 | GO:0090506: axillary shoot meristem initiation | 4.99E-04 |
| 11 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 6.66E-04 |
| 12 | GO:0009102: biotin biosynthetic process | 7.14E-04 |
| 13 | GO:0010239: chloroplast mRNA processing | 7.14E-04 |
| 14 | GO:0042989: sequestering of actin monomers | 7.14E-04 |
| 15 | GO:0016556: mRNA modification | 7.14E-04 |
| 16 | GO:0046739: transport of virus in multicellular host | 7.14E-04 |
| 17 | GO:0015976: carbon utilization | 9.47E-04 |
| 18 | GO:0008295: spermidine biosynthetic process | 9.47E-04 |
| 19 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 9.47E-04 |
| 20 | GO:0006665: sphingolipid metabolic process | 1.20E-03 |
| 21 | GO:0048359: mucilage metabolic process involved in seed coat development | 1.20E-03 |
| 22 | GO:0006656: phosphatidylcholine biosynthetic process | 1.20E-03 |
| 23 | GO:0000304: response to singlet oxygen | 1.20E-03 |
| 24 | GO:0030041: actin filament polymerization | 1.20E-03 |
| 25 | GO:0009828: plant-type cell wall loosening | 1.33E-03 |
| 26 | GO:0010405: arabinogalactan protein metabolic process | 1.47E-03 |
| 27 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.47E-03 |
| 28 | GO:0016554: cytidine to uridine editing | 1.47E-03 |
| 29 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.47E-03 |
| 30 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.47E-03 |
| 31 | GO:0006014: D-ribose metabolic process | 1.47E-03 |
| 32 | GO:0010019: chloroplast-nucleus signaling pathway | 1.76E-03 |
| 33 | GO:0010067: procambium histogenesis | 1.76E-03 |
| 34 | GO:2000033: regulation of seed dormancy process | 1.76E-03 |
| 35 | GO:1901259: chloroplast rRNA processing | 1.76E-03 |
| 36 | GO:0009082: branched-chain amino acid biosynthetic process | 1.76E-03 |
| 37 | GO:0009099: valine biosynthetic process | 1.76E-03 |
| 38 | GO:0010411: xyloglucan metabolic process | 1.85E-03 |
| 39 | GO:0006955: immune response | 2.06E-03 |
| 40 | GO:0009395: phospholipid catabolic process | 2.06E-03 |
| 41 | GO:0048528: post-embryonic root development | 2.06E-03 |
| 42 | GO:0051510: regulation of unidimensional cell growth | 2.06E-03 |
| 43 | GO:0016559: peroxisome fission | 2.39E-03 |
| 44 | GO:0006353: DNA-templated transcription, termination | 2.39E-03 |
| 45 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 2.73E-03 |
| 46 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.73E-03 |
| 47 | GO:0009657: plastid organization | 2.73E-03 |
| 48 | GO:0009097: isoleucine biosynthetic process | 2.73E-03 |
| 49 | GO:0009826: unidimensional cell growth | 2.76E-03 |
| 50 | GO:0048589: developmental growth | 3.08E-03 |
| 51 | GO:0015780: nucleotide-sugar transport | 3.08E-03 |
| 52 | GO:0006754: ATP biosynthetic process | 3.08E-03 |
| 53 | GO:0009098: leucine biosynthetic process | 3.46E-03 |
| 54 | GO:1900865: chloroplast RNA modification | 3.46E-03 |
| 55 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.46E-03 |
| 56 | GO:0042546: cell wall biogenesis | 3.46E-03 |
| 57 | GO:0006949: syncytium formation | 3.84E-03 |
| 58 | GO:0010162: seed dormancy process | 3.84E-03 |
| 59 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.97E-03 |
| 60 | GO:0009664: plant-type cell wall organization | 4.17E-03 |
| 61 | GO:0006415: translational termination | 4.24E-03 |
| 62 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.24E-03 |
| 63 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.65E-03 |
| 64 | GO:0010223: secondary shoot formation | 5.52E-03 |
| 65 | GO:0010207: photosystem II assembly | 5.52E-03 |
| 66 | GO:0090351: seedling development | 5.97E-03 |
| 67 | GO:0071732: cellular response to nitric oxide | 5.97E-03 |
| 68 | GO:0010025: wax biosynthetic process | 6.43E-03 |
| 69 | GO:0007017: microtubule-based process | 7.40E-03 |
| 70 | GO:0031408: oxylipin biosynthetic process | 7.91E-03 |
| 71 | GO:0071555: cell wall organization | 8.26E-03 |
| 72 | GO:0019748: secondary metabolic process | 8.42E-03 |
| 73 | GO:0035428: hexose transmembrane transport | 8.42E-03 |
| 74 | GO:0071369: cellular response to ethylene stimulus | 8.95E-03 |
| 75 | GO:0001944: vasculature development | 8.95E-03 |
| 76 | GO:0010089: xylem development | 9.49E-03 |
| 77 | GO:0010091: trichome branching | 9.49E-03 |
| 78 | GO:0016117: carotenoid biosynthetic process | 1.00E-02 |
| 79 | GO:0006633: fatty acid biosynthetic process | 1.00E-02 |
| 80 | GO:0010087: phloem or xylem histogenesis | 1.06E-02 |
| 81 | GO:0042335: cuticle development | 1.06E-02 |
| 82 | GO:0010182: sugar mediated signaling pathway | 1.12E-02 |
| 83 | GO:0046323: glucose import | 1.12E-02 |
| 84 | GO:0008360: regulation of cell shape | 1.12E-02 |
| 85 | GO:0009739: response to gibberellin | 1.23E-02 |
| 86 | GO:0010183: pollen tube guidance | 1.24E-02 |
| 87 | GO:0019252: starch biosynthetic process | 1.24E-02 |
| 88 | GO:0071554: cell wall organization or biogenesis | 1.30E-02 |
| 89 | GO:0071281: cellular response to iron ion | 1.42E-02 |
| 90 | GO:0016125: sterol metabolic process | 1.49E-02 |
| 91 | GO:0016126: sterol biosynthetic process | 1.68E-02 |
| 92 | GO:0009627: systemic acquired resistance | 1.82E-02 |
| 93 | GO:0015995: chlorophyll biosynthetic process | 1.89E-02 |
| 94 | GO:0016311: dephosphorylation | 1.96E-02 |
| 95 | GO:0009817: defense response to fungus, incompatible interaction | 2.03E-02 |
| 96 | GO:0018298: protein-chromophore linkage | 2.03E-02 |
| 97 | GO:0048767: root hair elongation | 2.11E-02 |
| 98 | GO:0009813: flavonoid biosynthetic process | 2.11E-02 |
| 99 | GO:0009407: toxin catabolic process | 2.18E-02 |
| 100 | GO:0048527: lateral root development | 2.25E-02 |
| 101 | GO:0016051: carbohydrate biosynthetic process | 2.41E-02 |
| 102 | GO:0006631: fatty acid metabolic process | 2.72E-02 |
| 103 | GO:0010114: response to red light | 2.88E-02 |
| 104 | GO:0008643: carbohydrate transport | 3.05E-02 |
| 105 | GO:0009636: response to toxic substance | 3.13E-02 |
| 106 | GO:0016310: phosphorylation | 3.16E-02 |
| 107 | GO:0006812: cation transport | 3.39E-02 |
| 108 | GO:0006813: potassium ion transport | 3.56E-02 |
| 109 | GO:0006096: glycolytic process | 4.01E-02 |
| 110 | GO:0043086: negative regulation of catalytic activity | 4.01E-02 |
| 111 | GO:0048367: shoot system development | 4.11E-02 |
| 112 | GO:0042545: cell wall modification | 4.48E-02 |
| 113 | GO:0009624: response to nematode | 4.58E-02 |
| 114 | GO:0006396: RNA processing | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | 0.00E+00 |
| 2 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 3 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 4 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 5 | GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity | 0.00E+00 |
| 6 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 7 | GO:0004496: mevalonate kinase activity | 0.00E+00 |
| 8 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 9 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 10 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 1.31E-04 |
| 11 | GO:0005227: calcium activated cation channel activity | 1.31E-04 |
| 12 | GO:0042834: peptidoglycan binding | 1.31E-04 |
| 13 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 1.31E-04 |
| 14 | GO:0004766: spermidine synthase activity | 3.03E-04 |
| 15 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 3.03E-04 |
| 16 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 3.03E-04 |
| 17 | GO:0016788: hydrolase activity, acting on ester bonds | 4.92E-04 |
| 18 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 4.99E-04 |
| 19 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 4.99E-04 |
| 20 | GO:0003913: DNA photolyase activity | 4.99E-04 |
| 21 | GO:0005504: fatty acid binding | 4.99E-04 |
| 22 | GO:0052654: L-leucine transaminase activity | 7.14E-04 |
| 23 | GO:0052655: L-valine transaminase activity | 7.14E-04 |
| 24 | GO:0001872: (1->3)-beta-D-glucan binding | 7.14E-04 |
| 25 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 7.14E-04 |
| 26 | GO:0016149: translation release factor activity, codon specific | 7.14E-04 |
| 27 | GO:0052656: L-isoleucine transaminase activity | 7.14E-04 |
| 28 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 7.14E-04 |
| 29 | GO:0052793: pectin acetylesterase activity | 9.47E-04 |
| 30 | GO:0004084: branched-chain-amino-acid transaminase activity | 9.47E-04 |
| 31 | GO:0045430: chalcone isomerase activity | 9.47E-04 |
| 32 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.11E-03 |
| 33 | GO:0009922: fatty acid elongase activity | 1.20E-03 |
| 34 | GO:0003785: actin monomer binding | 1.20E-03 |
| 35 | GO:0005200: structural constituent of cytoskeleton | 1.41E-03 |
| 36 | GO:0080030: methyl indole-3-acetate esterase activity | 1.47E-03 |
| 37 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.47E-03 |
| 38 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.47E-03 |
| 39 | GO:0051920: peroxiredoxin activity | 1.76E-03 |
| 40 | GO:0004747: ribokinase activity | 1.76E-03 |
| 41 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.85E-03 |
| 42 | GO:0009881: photoreceptor activity | 2.06E-03 |
| 43 | GO:0043295: glutathione binding | 2.06E-03 |
| 44 | GO:0016209: antioxidant activity | 2.39E-03 |
| 45 | GO:0008865: fructokinase activity | 2.39E-03 |
| 46 | GO:0003843: 1,3-beta-D-glucan synthase activity | 2.73E-03 |
| 47 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 3.08E-03 |
| 48 | GO:0003747: translation release factor activity | 3.08E-03 |
| 49 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 3.08E-03 |
| 50 | GO:0047617: acyl-CoA hydrolase activity | 3.46E-03 |
| 51 | GO:0004089: carbonate dehydratase activity | 5.08E-03 |
| 52 | GO:0009982: pseudouridine synthase activity | 5.08E-03 |
| 53 | GO:0004565: beta-galactosidase activity | 5.08E-03 |
| 54 | GO:0030599: pectinesterase activity | 5.98E-03 |
| 55 | GO:0008324: cation transmembrane transporter activity | 7.40E-03 |
| 56 | GO:0033612: receptor serine/threonine kinase binding | 7.91E-03 |
| 57 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 8.17E-03 |
| 58 | GO:0008514: organic anion transmembrane transporter activity | 9.49E-03 |
| 59 | GO:0005102: receptor binding | 1.00E-02 |
| 60 | GO:0003713: transcription coactivator activity | 1.12E-02 |
| 61 | GO:0005355: glucose transmembrane transporter activity | 1.18E-02 |
| 62 | GO:0050662: coenzyme binding | 1.18E-02 |
| 63 | GO:0019901: protein kinase binding | 1.24E-02 |
| 64 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.55E-02 |
| 65 | GO:0016413: O-acetyltransferase activity | 1.62E-02 |
| 66 | GO:0004601: peroxidase activity | 1.71E-02 |
| 67 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.84E-02 |
| 68 | GO:0030247: polysaccharide binding | 1.89E-02 |
| 69 | GO:0008236: serine-type peptidase activity | 1.96E-02 |
| 70 | GO:0004497: monooxygenase activity | 2.12E-02 |
| 71 | GO:0050897: cobalt ion binding | 2.25E-02 |
| 72 | GO:0052689: carboxylic ester hydrolase activity | 2.34E-02 |
| 73 | GO:0003746: translation elongation factor activity | 2.41E-02 |
| 74 | GO:0003993: acid phosphatase activity | 2.48E-02 |
| 75 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.64E-02 |
| 76 | GO:0004364: glutathione transferase activity | 2.80E-02 |
| 77 | GO:0004185: serine-type carboxypeptidase activity | 2.88E-02 |
| 78 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.05E-02 |
| 79 | GO:0043621: protein self-association | 3.05E-02 |
| 80 | GO:0004519: endonuclease activity | 3.40E-02 |
| 81 | GO:0045330: aspartyl esterase activity | 3.83E-02 |
| 82 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.11E-02 |
| 83 | GO:0003779: actin binding | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.95E-07 |
| 2 | GO:0005618: cell wall | 1.26E-06 |
| 3 | GO:0046658: anchored component of plasma membrane | 2.82E-06 |
| 4 | GO:0009570: chloroplast stroma | 1.46E-05 |
| 5 | GO:0031225: anchored component of membrane | 4.79E-05 |
| 6 | GO:0009923: fatty acid elongase complex | 1.31E-04 |
| 7 | GO:0005886: plasma membrane | 2.54E-04 |
| 8 | GO:0005853: eukaryotic translation elongation factor 1 complex | 4.99E-04 |
| 9 | GO:0048046: apoplast | 1.99E-03 |
| 10 | GO:0000148: 1,3-beta-D-glucan synthase complex | 2.73E-03 |
| 11 | GO:0009536: plastid | 2.95E-03 |
| 12 | GO:0045298: tubulin complex | 3.08E-03 |
| 13 | GO:0009941: chloroplast envelope | 3.48E-03 |
| 14 | GO:0009579: thylakoid | 3.72E-03 |
| 15 | GO:0005938: cell cortex | 5.08E-03 |
| 16 | GO:0043234: protein complex | 6.43E-03 |
| 17 | GO:0009543: chloroplast thylakoid lumen | 7.95E-03 |
| 18 | GO:0015629: actin cytoskeleton | 8.95E-03 |
| 19 | GO:0005576: extracellular region | 9.84E-03 |
| 20 | GO:0009505: plant-type cell wall | 1.16E-02 |
| 21 | GO:0009534: chloroplast thylakoid | 1.64E-02 |
| 22 | GO:0009707: chloroplast outer membrane | 2.03E-02 |
| 23 | GO:0031969: chloroplast membrane | 2.12E-02 |
| 24 | GO:0031977: thylakoid lumen | 2.72E-02 |
| 25 | GO:0005856: cytoskeleton | 3.13E-02 |
| 26 | GO:0009706: chloroplast inner membrane | 4.58E-02 |