Gene: AT5G62570
     


Gene description


TAIR ID: AT5G62570

Short description: Calmodulin binding protein-like

Pathogen responsiveness: -0.12

General responsiveness: -1.22

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


negative regulation of defense response to bacterium, incompatible interaction, regulation of transcription, DNA-templated, transcription, response to stress


GO cellular component


nucleus


GO molecular function


calmodulin binding, DNA binding


Protein domain


PfamPF07887, Calmodulin binding protein-like

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G18770, AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


19 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h1.642.05E-05
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 30 min2.252.56E-02
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min1.781.11E-04
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min1.563.10E-04
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.763.05E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.772.87E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.154.94E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.635.91E-13
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.121.77E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.751.11E-13
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.657.76E-13
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min1.601.55E-04
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h1.541.45E-04
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h1.621.41E-04
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h1.591.22E-04
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h1.653.67E-05
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h1.771.19E-07
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min1.795.73E-11
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h1.504.57E-03






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