Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G61890

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
2GO:0009699: phenylpropanoid biosynthetic process2.89E-06
3GO:0015706: nitrate transport8.26E-06
4GO:0046244: salicylic acid catabolic process1.30E-05
5GO:0009611: response to wounding1.86E-05
6GO:0015865: purine nucleotide transport3.42E-05
7GO:0080167: response to karrikin7.58E-05
8GO:0042128: nitrate assimilation8.92E-05
9GO:0009800: cinnamic acid biosynthetic process9.36E-05
10GO:0046902: regulation of mitochondrial membrane permeability9.36E-05
11GO:0045227: capsule polysaccharide biosynthetic process1.30E-04
12GO:0033358: UDP-L-arabinose biosynthetic process1.30E-04
13GO:0033365: protein localization to organelle2.10E-04
14GO:0006559: L-phenylalanine catabolic process2.10E-04
15GO:0006744: ubiquinone biosynthetic process2.99E-04
16GO:0006605: protein targeting3.46E-04
17GO:0009819: drought recovery3.46E-04
18GO:0009808: lignin metabolic process3.94E-04
19GO:0055085: transmembrane transport4.00E-04
20GO:0010345: suberin biosynthetic process4.45E-04
21GO:0006949: syncytium formation5.49E-04
22GO:0016036: cellular response to phosphate starvation5.60E-04
23GO:0009698: phenylpropanoid metabolic process6.03E-04
24GO:0000266: mitochondrial fission6.58E-04
25GO:0046274: lignin catabolic process7.14E-04
26GO:0055046: microgametogenesis7.14E-04
27GO:0009718: anthocyanin-containing compound biosynthetic process7.14E-04
28GO:0006446: regulation of translational initiation7.72E-04
29GO:0009225: nucleotide-sugar metabolic process8.32E-04
30GO:0040007: growth1.21E-03
31GO:0006012: galactose metabolic process1.21E-03
32GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.21E-03
33GO:0009561: megagametogenesis1.27E-03
34GO:0006629: lipid metabolic process1.61E-03
35GO:0009556: microsporogenesis1.63E-03
36GO:0032502: developmental process1.78E-03
37GO:0009828: plant-type cell wall loosening1.94E-03
38GO:0009555: pollen development2.82E-03
39GO:0007568: aging2.87E-03
40GO:0055114: oxidation-reduction process3.84E-03
41GO:0009664: plant-type cell wall organization4.23E-03
42GO:0009809: lignin biosynthetic process4.44E-03
43GO:0010224: response to UV-B4.55E-03
44GO:0009845: seed germination6.98E-03
45GO:0006413: translational initiation7.87E-03
46GO:0007623: circadian rhythm8.26E-03
47GO:0009826: unidimensional cell growth1.09E-02
48GO:0010200: response to chitin1.34E-02
49GO:0045892: negative regulation of transcription, DNA-templated1.50E-02
50GO:0006886: intracellular protein transport1.52E-02
51GO:0009753: response to jasmonic acid1.81E-02
52GO:0009873: ethylene-activated signaling pathway2.07E-02
53GO:0009416: response to light stimulus2.59E-02
54GO:0006979: response to oxidative stress4.31E-02
55GO:0030154: cell differentiation4.55E-02
RankGO TermAdjusted P value
1GO:0016710: trans-cinnamate 4-monooxygenase activity0.00E+00
2GO:0015112: nitrate transmembrane transporter activity4.63E-06
3GO:0050062: long-chain-fatty-acyl-CoA reductase activity3.42E-05
4GO:0033897: ribonuclease T2 activity6.16E-05
5GO:0045548: phenylalanine ammonia-lyase activity6.16E-05
6GO:0050373: UDP-arabinose 4-epimerase activity1.30E-04
7GO:0005471: ATP:ADP antiporter activity1.68E-04
8GO:0080019: fatty-acyl-CoA reductase (alcohol-forming) activity2.53E-04
9GO:0003978: UDP-glucose 4-epimerase activity2.53E-04
10GO:0052747: sinapyl alcohol dehydrogenase activity3.46E-04
11GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors4.45E-04
12GO:0045551: cinnamyl-alcohol dehydrogenase activity6.58E-04
13GO:0004521: endoribonuclease activity6.58E-04
14GO:0004022: alcohol dehydrogenase (NAD) activity7.14E-04
15GO:0004540: ribonuclease activity1.08E-03
16GO:0005199: structural constituent of cell wall1.48E-03
17GO:0001085: RNA polymerase II transcription factor binding1.48E-03
18GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.61E-03
19GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.87E-03
20GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.87E-03
21GO:0008026: ATP-dependent helicase activity5.89E-03
22GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding7.23E-03
23GO:0003743: translation initiation factor activity9.21E-03
24GO:0042802: identical protein binding9.77E-03
25GO:0003682: chromatin binding1.17E-02
26GO:0005515: protein binding1.20E-02
27GO:0050660: flavin adenine dinucleotide binding1.24E-02
28GO:0009055: electron carrier activity1.81E-02
29GO:0005507: copper ion binding3.33E-02
30GO:0003700: transcription factor activity, sequence-specific DNA binding3.50E-02
31GO:0005525: GTP binding3.70E-02
32GO:0008270: zinc ion binding4.16E-02
33GO:0005506: iron ion binding4.24E-02
34GO:0044212: transcription regulatory region DNA binding4.29E-02
35GO:0003824: catalytic activity4.58E-02
RankGO TermAdjusted P value
1GO:0030688: preribosome, small subunit precursor1.30E-05
2GO:0005740: mitochondrial envelope5.49E-04
3GO:0009505: plant-type cell wall9.48E-04
4GO:0005741: mitochondrial outer membrane1.08E-03
5GO:0005770: late endosome1.48E-03
6GO:0032580: Golgi cisterna membrane1.94E-03
7GO:0005667: transcription factor complex2.35E-03
8GO:0016021: integral component of membrane5.43E-03
9GO:0005743: mitochondrial inner membrane1.64E-02
10GO:0005774: vacuolar membrane1.97E-02
11GO:0005618: cell wall2.26E-02
12GO:0005886: plasma membrane2.71E-02
13GO:0005777: peroxisome2.86E-02
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Gene type



Gene DE type