Gene: AT5G60980
     

Gene description


TAIR ID: AT5G60980

Short description: Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain

Pathogen responsiveness: -2.08

General responsiveness: -1.57

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G139407   GRMZM2G089676   GRMZM2G069174  

Wheat:

TA.14478.3.S1_AT  


GO biological process


response to abscisic acid, transport, nucleocytoplasmic transport


GO cellular component


cytosol, intracellular ribonucleoprotein complex, intracellular


GO molecular function


unkown


Protein domain


PfamPF02136, Nuclear transport factor 2 (NTF2) domain
PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMARTSM00360, RRM

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


2 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, PstDC3000 12 h1.893.18E-11
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.111.29E-02






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