GO Enrichment Analysis of Co-expressed Genes with
AT5G60980
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 2 | GO:0015979: photosynthesis | 7.67E-08 |
| 3 | GO:0042549: photosystem II stabilization | 4.50E-06 |
| 4 | GO:0010205: photoinhibition | 2.46E-05 |
| 5 | GO:0043953: protein transport by the Tat complex | 3.77E-05 |
| 6 | GO:0065002: intracellular protein transmembrane transport | 3.77E-05 |
| 7 | GO:0010493: Lewis a epitope biosynthetic process | 3.77E-05 |
| 8 | GO:0010207: photosystem II assembly | 5.65E-05 |
| 9 | GO:0035304: regulation of protein dephosphorylation | 9.40E-05 |
| 10 | GO:0080181: lateral root branching | 9.40E-05 |
| 11 | GO:0005977: glycogen metabolic process | 1.63E-04 |
| 12 | GO:0022622: root system development | 3.24E-04 |
| 13 | GO:0006552: leucine catabolic process | 3.24E-04 |
| 14 | GO:0010021: amylopectin biosynthetic process | 3.24E-04 |
| 15 | GO:0009765: photosynthesis, light harvesting | 3.24E-04 |
| 16 | GO:0018298: protein-chromophore linkage | 4.20E-04 |
| 17 | GO:0009769: photosynthesis, light harvesting in photosystem II | 7.07E-04 |
| 18 | GO:1900057: positive regulation of leaf senescence | 7.07E-04 |
| 19 | GO:0009645: response to low light intensity stimulus | 7.07E-04 |
| 20 | GO:0022904: respiratory electron transport chain | 7.07E-04 |
| 21 | GO:0032880: regulation of protein localization | 7.07E-04 |
| 22 | GO:0030091: protein repair | 8.13E-04 |
| 23 | GO:0009231: riboflavin biosynthetic process | 8.13E-04 |
| 24 | GO:0010206: photosystem II repair | 1.04E-03 |
| 25 | GO:0019684: photosynthesis, light reaction | 1.40E-03 |
| 26 | GO:2000012: regulation of auxin polar transport | 1.67E-03 |
| 27 | GO:0009767: photosynthetic electron transport chain | 1.67E-03 |
| 28 | GO:0006302: double-strand break repair | 1.81E-03 |
| 29 | GO:0010030: positive regulation of seed germination | 1.95E-03 |
| 30 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.40E-03 |
| 31 | GO:0051321: meiotic cell cycle | 2.56E-03 |
| 32 | GO:0061077: chaperone-mediated protein folding | 2.56E-03 |
| 33 | GO:0009269: response to desiccation | 2.56E-03 |
| 34 | GO:0071369: cellular response to ethylene stimulus | 2.89E-03 |
| 35 | GO:0008284: positive regulation of cell proliferation | 3.22E-03 |
| 36 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.22E-03 |
| 37 | GO:0042631: cellular response to water deprivation | 3.40E-03 |
| 38 | GO:0009958: positive gravitropism | 3.58E-03 |
| 39 | GO:0009646: response to absence of light | 3.76E-03 |
| 40 | GO:0019252: starch biosynthetic process | 3.94E-03 |
| 41 | GO:0071554: cell wall organization or biogenesis | 4.13E-03 |
| 42 | GO:0032502: developmental process | 4.32E-03 |
| 43 | GO:0009567: double fertilization forming a zygote and endosperm | 4.70E-03 |
| 44 | GO:0045454: cell redox homeostasis | 4.84E-03 |
| 45 | GO:0010027: thylakoid membrane organization | 5.31E-03 |
| 46 | GO:0015995: chlorophyll biosynthetic process | 5.94E-03 |
| 47 | GO:0016311: dephosphorylation | 6.16E-03 |
| 48 | GO:0010218: response to far red light | 6.82E-03 |
| 49 | GO:0048527: lateral root development | 7.05E-03 |
| 50 | GO:0007568: aging | 7.05E-03 |
| 51 | GO:0009867: jasmonic acid mediated signaling pathway | 7.51E-03 |
| 52 | GO:0009637: response to blue light | 7.51E-03 |
| 53 | GO:0010114: response to red light | 8.96E-03 |
| 54 | GO:0009644: response to high light intensity | 9.47E-03 |
| 55 | GO:0006486: protein glycosylation | 1.11E-02 |
| 56 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.13E-02 |
| 57 | GO:0005975: carbohydrate metabolic process | 3.26E-02 |
| 58 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.40E-02 |
| 59 | GO:0006281: DNA repair | 4.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004174: electron-transferring-flavoprotein dehydrogenase activity | 0.00E+00 |
| 2 | GO:0048039: ubiquinone binding | 0.00E+00 |
| 3 | GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor | 0.00E+00 |
| 4 | GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity | 0.00E+00 |
| 5 | GO:0046920: alpha-(1->3)-fucosyltransferase activity | 3.77E-05 |
| 6 | GO:0010242: oxygen evolving activity | 3.77E-05 |
| 7 | GO:0045157: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity | 3.77E-05 |
| 8 | GO:0008266: poly(U) RNA binding | 5.65E-05 |
| 9 | GO:0019156: isoamylase activity | 9.40E-05 |
| 10 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 9.40E-05 |
| 11 | GO:0003913: DNA photolyase activity | 1.63E-04 |
| 12 | GO:0004324: ferredoxin-NADP+ reductase activity | 1.63E-04 |
| 13 | GO:0016851: magnesium chelatase activity | 2.40E-04 |
| 14 | GO:0003959: NADPH dehydrogenase activity | 4.13E-04 |
| 15 | GO:0030145: manganese ion binding | 4.85E-04 |
| 16 | GO:0042578: phosphoric ester hydrolase activity | 5.07E-04 |
| 17 | GO:0004556: alpha-amylase activity | 5.07E-04 |
| 18 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 6.05E-04 |
| 19 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 6.05E-04 |
| 20 | GO:0009881: photoreceptor activity | 7.07E-04 |
| 21 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.83E-04 |
| 22 | GO:0008417: fucosyltransferase activity | 1.04E-03 |
| 23 | GO:0008083: growth factor activity | 1.81E-03 |
| 24 | GO:0031409: pigment binding | 2.10E-03 |
| 25 | GO:0005528: FK506 binding | 2.25E-03 |
| 26 | GO:0008408: 3'-5' exonuclease activity | 2.56E-03 |
| 27 | GO:0003727: single-stranded RNA binding | 3.05E-03 |
| 28 | GO:0016413: O-acetyltransferase activity | 5.11E-03 |
| 29 | GO:0016168: chlorophyll binding | 5.52E-03 |
| 30 | GO:0009055: electron carrier activity | 6.39E-03 |
| 31 | GO:0003993: acid phosphatase activity | 7.75E-03 |
| 32 | GO:0051539: 4 iron, 4 sulfur cluster binding | 8.23E-03 |
| 33 | GO:0004185: serine-type carboxypeptidase activity | 8.96E-03 |
| 34 | GO:0015035: protein disulfide oxidoreductase activity | 1.45E-02 |
| 35 | GO:0005509: calcium ion binding | 1.98E-02 |
| 36 | GO:0008017: microtubule binding | 2.16E-02 |
| 37 | GO:0003824: catalytic activity | 2.36E-02 |
| 38 | GO:0042802: identical protein binding | 2.48E-02 |
| 39 | GO:0004722: protein serine/threonine phosphatase activity | 4.03E-02 |
| 40 | GO:0004519: endonuclease activity | 4.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009349: riboflavin synthase complex | 0.00E+00 |
| 3 | GO:0017133: mitochondrial electron transfer flavoprotein complex | 0.00E+00 |
| 4 | GO:0043235: receptor complex | 0.00E+00 |
| 5 | GO:0009507: chloroplast | 4.33E-11 |
| 6 | GO:0009579: thylakoid | 8.30E-11 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 1.60E-09 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.26E-07 |
| 9 | GO:0030095: chloroplast photosystem II | 5.63E-07 |
| 10 | GO:0031977: thylakoid lumen | 6.46E-07 |
| 11 | GO:0009534: chloroplast thylakoid | 1.76E-06 |
| 12 | GO:0009538: photosystem I reaction center | 1.21E-05 |
| 13 | GO:0009570: chloroplast stroma | 2.44E-05 |
| 14 | GO:0000791: euchromatin | 3.77E-05 |
| 15 | GO:0031361: integral component of thylakoid membrane | 3.77E-05 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 9.26E-05 |
| 17 | GO:0030870: Mre11 complex | 9.40E-05 |
| 18 | GO:0010287: plastoglobule | 1.20E-04 |
| 19 | GO:0010007: magnesium chelatase complex | 1.63E-04 |
| 20 | GO:0033281: TAT protein transport complex | 1.63E-04 |
| 21 | GO:0009523: photosystem II | 2.06E-04 |
| 22 | GO:0019898: extrinsic component of membrane | 2.06E-04 |
| 23 | GO:0009517: PSII associated light-harvesting complex II | 3.24E-04 |
| 24 | GO:0000795: synaptonemal complex | 4.13E-04 |
| 25 | GO:0009533: chloroplast stromal thylakoid | 7.07E-04 |
| 26 | GO:0031305: integral component of mitochondrial inner membrane | 8.13E-04 |
| 27 | GO:0008180: COP9 signalosome | 1.04E-03 |
| 28 | GO:0055028: cortical microtubule | 1.28E-03 |
| 29 | GO:0005740: mitochondrial envelope | 1.28E-03 |
| 30 | GO:0030076: light-harvesting complex | 1.95E-03 |
| 31 | GO:0009522: photosystem I | 3.76E-03 |
| 32 | GO:0005874: microtubule | 3.91E-03 |
| 33 | GO:0000785: chromatin | 4.32E-03 |
| 34 | GO:0032580: Golgi cisterna membrane | 4.70E-03 |
| 35 | GO:0019005: SCF ubiquitin ligase complex | 6.38E-03 |
| 36 | GO:0009941: chloroplast envelope | 6.84E-03 |
| 37 | GO:0000502: proteasome complex | 1.11E-02 |
| 38 | GO:0005615: extracellular space | 2.26E-02 |