gene detail

Gene description

TAIR ID: AT5G60910

Short description: AGAMOUS-like 8

Pathogen responsiveness: -1.74

General responsiveness: -0.45

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, transcription, cell differentiation, fruit development, positive regulation of transcription from RNA polymerase II promoter, maintenance of inflorescence meristem identity, flower development, positive regulation of flower development

GO cellular component

nucleus

GO molecular function

protein dimerization activity, protein binding, RNA polymerase II regulatory region sequence-specific DNA binding, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF01486, K-box region
Pfam	PF00319, SRF-type transcription factor (DNA-binding and dimerisation domain)
SMART	SM00432, MADS

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT2G33810, AT4G00180, AT1G69120, AT1G24260, AT2G45190

Target:
AT3G58780, AT2G42830, AT5G61850, AT5G67110, AT4G00120

Protein-protein interaction network

The number of partners (degree) is: 17 (Top10%)

click to view PPI network

Coexpression network

GSE5686_WT_GO view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.75	2.40E-03
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.73	2.16E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.54	1.57E-04
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	-1.56	2.31E-03
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	-1.89	4.35E-04
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-1.54	1.12E-03