Gene: AT5G60890
     


Gene description


TAIR ID: AT5G60890

Short description: myb domain protein 34

Pathogen responsiveness: 0.15

General responsiveness: 0.73

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


positive regulation of transcription, DNA-templated, cellular response to sulfur starvation, indole glucosinolate biosynthetic process, regulation of transcription from RNA polymerase II promoter, response to jasmonic acid, cell differentiation, tryptophan biosynthetic process, transcription, defense response to insect


GO cellular component


nucleus


GO molecular function


kinase activity, transcription factor activity, sequence-specific DNA binding, RNA polymerase II transcription factor recruiting, transcription regulatory region DNA binding, RNA polymerase II transcription factor activity


Protein domain


PfamPF00249, Myb-like DNA-binding domain
SMARTSM00717, SANT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G07100, AT2G38470, AT1G73730, AT4G31800

Target:
AT4G31500, AT5G05730, AT4G39950, AT2G22330, AT2G20610

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


24 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.772.25E-05
GSE13739Col, WT, control 0 hCol, WT, G.orontii 5 d-1.501.04E-03
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d-1.602.85E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.022.48E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.324.68E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.161.22E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.804.44E-03
GSE20278Col, RPL18-HF, control, polysomal RNACol, RPL18-HF, TuMV 10 d, polysomal RNA-1.521.97E-02
GSE2169Col, rre2, waterCol, rre2, chitin 30 min-1.566.56E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h1.532.24E-07
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-3.011.48E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.711.20E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.912.51E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.011.06E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.941.89E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.341.03E-10
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-1.576.44E-07
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.692.04E-07
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.355.13E-05
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-1.878.43E-03
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h1.961.01E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-3.571.05E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-1.792.40E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.721.56E-03






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