co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G60890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045860: positive regulation of protein kinase activity	0.00E+00
2	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
3	GO:0090042: tubulin deacetylation	0.00E+00
4	GO:0015808: L-alanine transport	2.41E-05
5	GO:0010480: microsporocyte differentiation	2.41E-05
6	GO:0042547: cell wall modification involved in multidimensional cell growth	2.41E-05
7	GO:0010028: xanthophyll cycle	2.41E-05
8	GO:0098712: L-glutamate import across plasma membrane	6.16E-05
9	GO:0016122: xanthophyll metabolic process	6.16E-05
10	GO:0010289: homogalacturonan biosynthetic process	6.16E-05
11	GO:0010270: photosystem II oxygen evolving complex assembly	6.16E-05
12	GO:0015804: neutral amino acid transport	6.16E-05
13	GO:0055129: L-proline biosynthetic process	6.16E-05
14	GO:0080170: hydrogen peroxide transmembrane transport	1.62E-04
15	GO:0010088: phloem development	1.62E-04
16	GO:0015994: chlorophyll metabolic process	2.21E-04
17	GO:0009913: epidermal cell differentiation	3.51E-04
18	GO:0006561: proline biosynthetic process	3.51E-04
19	GO:0006828: manganese ion transport	3.51E-04
20	GO:0043090: amino acid import	4.92E-04
21	GO:0048437: floral organ development	4.92E-04
22	GO:0008610: lipid biosynthetic process	5.68E-04
23	GO:0006098: pentose-phosphate shunt	7.25E-04
24	GO:0006535: cysteine biosynthetic process from serine	8.92E-04
25	GO:0048229: gametophyte development	9.78E-04
26	GO:0000038: very long-chain fatty acid metabolic process	9.78E-04
27	GO:0006816: calcium ion transport	9.78E-04
28	GO:0005983: starch catabolic process	1.07E-03
29	GO:0009718: anthocyanin-containing compound biosynthetic process	1.16E-03
30	GO:0010075: regulation of meristem growth	1.16E-03
31	GO:0006094: gluconeogenesis	1.16E-03
32	GO:0009934: regulation of meristem structural organization	1.25E-03
33	GO:0006468: protein phosphorylation	1.40E-03
34	GO:0006833: water transport	1.45E-03
35	GO:0019344: cysteine biosynthetic process	1.55E-03
36	GO:0016575: histone deacetylation	1.65E-03
37	GO:0009814: defense response, incompatible interaction	1.87E-03
38	GO:0071369: cellular response to ethylene stimulus	1.98E-03
39	GO:0010089: xylem development	2.10E-03
40	GO:0034220: ion transmembrane transport	2.33E-03
41	GO:0048653: anther development	2.33E-03
42	GO:0042335: cuticle development	2.33E-03
43	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.40E-03
44	GO:0001666: response to hypoxia	3.63E-03
45	GO:0016126: sterol biosynthetic process	3.63E-03
46	GO:0008152: metabolic process	3.75E-03
47	GO:0015995: chlorophyll biosynthetic process	4.05E-03
48	GO:0016051: carbohydrate biosynthetic process	5.11E-03
49	GO:0006631: fatty acid metabolic process	5.75E-03
50	GO:0009416: response to light stimulus	6.02E-03
51	GO:0045893: positive regulation of transcription, DNA-templated	6.90E-03
52	GO:0042538: hyperosmotic salinity response	7.11E-03
53	GO:0055085: transmembrane transport	7.63E-03
54	GO:0006096: glycolytic process	8.40E-03
55	GO:0009624: response to nematode	9.56E-03
56	GO:0018105: peptidyl-serine phosphorylation	9.75E-03
57	GO:0006633: fatty acid biosynthetic process	1.31E-02
58	GO:0045490: pectin catabolic process	1.40E-02
59	GO:0006470: protein dephosphorylation	1.54E-02
60	GO:0080167: response to karrikin	2.23E-02
61	GO:0046777: protein autophosphorylation	2.34E-02
62	GO:0009737: response to abscisic acid	2.61E-02
63	GO:0006869: lipid transport	2.71E-02
64	GO:0006629: lipid metabolic process	2.95E-02
65	GO:0009408: response to heat	2.95E-02
66	GO:0016310: phosphorylation	3.00E-02
67	GO:0048364: root development	3.04E-02
68	GO:0009908: flower development	4.13E-02
69	GO:0009555: pollen development	4.43E-02
70	GO:0035556: intracellular signal transduction	4.61E-02
71	GO:0055114: oxidation-reduction process	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0004676: 3-phosphoinositide-dependent protein kinase activity	0.00E+00
2	GO:0043014: alpha-tubulin binding	0.00E+00
3	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
4	GO:0051721: protein phosphatase 2A binding	0.00E+00
5	GO:0042903: tubulin deacetylase activity	0.00E+00
6	GO:0019203: carbohydrate phosphatase activity	2.41E-05
7	GO:0050139: nicotinate-N-glucosyltransferase activity	2.41E-05
8	GO:0015194: L-serine transmembrane transporter activity	2.41E-05
9	GO:0004349: glutamate 5-kinase activity	2.41E-05
10	GO:0050308: sugar-phosphatase activity	2.41E-05
11	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	2.41E-05
12	GO:0015095: magnesium ion transmembrane transporter activity	2.52E-05
13	GO:0015180: L-alanine transmembrane transporter activity	6.16E-05
14	GO:0050017: L-3-cyanoalanine synthase activity	6.16E-05
15	GO:0015193: L-proline transmembrane transporter activity	1.09E-04
16	GO:0048487: beta-tubulin binding	1.62E-04
17	GO:0015186: L-glutamine transmembrane transporter activity	1.62E-04
18	GO:0019201: nucleotide kinase activity	1.62E-04
19	GO:0015175: neutral amino acid transmembrane transporter activity	1.62E-04
20	GO:0005313: L-glutamate transmembrane transporter activity	2.21E-04
21	GO:0004506: squalene monooxygenase activity	2.21E-04
22	GO:2001070: starch binding	3.51E-04
23	GO:0004332: fructose-bisphosphate aldolase activity	3.51E-04
24	GO:0004017: adenylate kinase activity	4.20E-04
25	GO:0004124: cysteine synthase activity	4.20E-04
26	GO:0070300: phosphatidic acid binding	4.20E-04
27	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	6.45E-04
28	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	7.25E-04
29	GO:0005384: manganese ion transmembrane transporter activity	8.07E-04
30	GO:0008194: UDP-glycosyltransferase activity	1.37E-03
31	GO:0005524: ATP binding	1.40E-03
32	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.45E-03
33	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.45E-03
34	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.45E-03
35	GO:0004407: histone deacetylase activity	1.55E-03
36	GO:0033612: receptor serine/threonine kinase binding	1.76E-03
37	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.87E-03
38	GO:0030570: pectate lyase activity	1.98E-03
39	GO:0004672: protein kinase activity	3.04E-03
40	GO:0004674: protein serine/threonine kinase activity	3.06E-03
41	GO:0015250: water channel activity	3.63E-03
42	GO:0043621: protein self-association	6.42E-03
43	GO:0035091: phosphatidylinositol binding	6.42E-03
44	GO:0015293: symporter activity	6.59E-03
45	GO:0016298: lipase activity	7.65E-03
46	GO:0015171: amino acid transmembrane transporter activity	8.02E-03
47	GO:0031625: ubiquitin protein ligase binding	8.02E-03
48	GO:0016757: transferase activity, transferring glycosyl groups	8.81E-03
49	GO:0080043: quercetin 3-O-glucosyltransferase activity	8.97E-03
50	GO:0080044: quercetin 7-O-glucosyltransferase activity	8.97E-03
51	GO:0016746: transferase activity, transferring acyl groups	9.75E-03
52	GO:0016829: lyase activity	1.18E-02
53	GO:0030170: pyridoxal phosphate binding	1.20E-02
54	GO:0008017: microtubule binding	1.45E-02
55	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.66E-02
56	GO:0016301: kinase activity	1.96E-02
57	GO:0050660: flavin adenine dinucleotide binding	2.12E-02
58	GO:0008289: lipid binding	3.73E-02

Rank	GO Term	Adjusted P value
1	GO:0055028: cortical microtubule	8.92E-04
2	GO:0009535: chloroplast thylakoid membrane	9.35E-04
3	GO:0030095: chloroplast photosystem II	1.25E-03
4	GO:0009507: chloroplast	1.47E-03
5	GO:0031977: thylakoid lumen	5.75E-03
6	GO:0009534: chloroplast thylakoid	7.26E-03
7	GO:0016021: integral component of membrane	1.11E-02
8	GO:0009543: chloroplast thylakoid lumen	1.12E-02
9	GO:0005886: plasma membrane	1.27E-02
10	GO:0046658: anchored component of plasma membrane	1.71E-02
11	GO:0005874: microtubule	2.18E-02
12	GO:0031969: chloroplast membrane	2.23E-02
13	GO:0043231: intracellular membrane-bounded organelle	3.16E-02
14	GO:0005887: integral component of plasma membrane	3.66E-02
15	GO:0005777: peroxisome	4.89E-02