Gene: AT5G59820
Gene description
TAIR ID: AT5G59820
Short description: C2H2-type zinc finger family protein
Pathogen responsiveness: 2.27
General responsiveness: 2.28
Orthologous
Rice:
Maize: No orthologous gene
GO biological process
regulation of transcription, DNA-templated, response to wounding, response to light stimulus, response to chitin, response to heat, hyperosmotic salinity response, cold acclimation, response to oxidative stress, response to cold, response to UV-B, transcription, photosynthetic acclimation
GO cellular component
nucleus
GO molecular function
metal ion binding, transcription factor activity, sequence-specific DNA binding
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Transcriptional regulation
Regulator:
AT5G13790, AT5G11260, AT1G24260, AT2G20180
Target:
AT4G25470, AT4G25480, AT4G25490, AT1G07890, AT3G46090, AT2G30250
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
65 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE12856 | Col, WT, control | Col, WT, Bg h | 3.06 | 2.88E-07 |
| GSE12856 | Col, ataf1, control | Col, ataf1, Bg h | 3.92 | 2.25E-08 |
| GSE13739 | Col, WT, control 7 d | Col, WT, G.orontii 7 d | 1.77 | 6.69E-09 |
| GSE17464 | Laer, control | Laer, Flg22 1 h | 2.10 | 6.72E-04 |
| GSE17464 | Laer, control | Laer, Flg22 2 h | 1.51 | 1.29E-02 |
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | 2.27 | 7.06E-04 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | 2.79 | 8.32E-05 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | 2.65 | 1.78E-04 |
| GSE18329 | Col, WT, control | Col, WT, Hpa noco2 96 h | 2.40 | 2.28E-12 |
| GSE18329 | Col, wrky72_1, control | Col, wrky72_2, Hpa noco2 96 h | 1.56 | 1.22E-09 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | 4.62 | 5.59E-13 |
| GSE2169 | Col, WT, water | Col, WT, chitin 30 min | 1.70 | 3.81E-09 |
| GSE2169 | Col, rre1, water | Col, rre1, chitin 30 min | 2.24 | 2.20E-11 |
| GSE2169 | Col, rre2, water | Col, rre2, chitin 30 min | 2.30 | 1.64E-11 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a 6 h | 2.16 | 1.40E-04 |
| GSE2538 | Col, WT, control | Col, WT, crab shell chitin 30 min | 3.68 | 1.37E-08 |
| GSE2538 | Col, WT, control | Col, WT, purified chitin octamer 30 min | 3.21 | 3.06E-08 |
| GSE26206 | Col, WT, control | Col, WT, R.solani_AG8 7 d | 1.93 | 2.68E-06 |
| GSE37269 | Di2, WT, control | Di2, WT, TEV 21 d | 1.60 | 2.30E-02 |
| GSE37269 | Ler0, WT, control | Ler0, WT, TEV 21 d | 1.94 | 8.33E-04 |
| GSE37921 | Col, WT, control | Col, WT, CMV | 1.69 | 2.01E-02 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | 1.69 | 3.05E-04 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | 2.06 | 4.00E-05 |
| GSE40544 | Col, Sid2, control | Col, Sid2, PstDC3000 AvrRpt2 | 1.59 | 5.30E-04 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 3.88 | 4.22E-12 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 4.07 | 1.02E-11 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 4.38 | 1.12E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 6.63 | 3.34E-15 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 6.63 | 3.68E-15 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 7.10 | 1.25E-15 |
| GSE45214 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 5.43 | 2.15E-12 |
| GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 4.31 | 8.13E-11 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 6.37 | 7.80E-14 |
| GSE45214 | Col, npr1, PstDC3000 AvrRpt2 0 h | Col, npr1, PstDC3000 AvrRpt2 4 h | 4.87 | 1.56E-11 |
| GSE4746 | Col, WT, water 30 min | Col, WT, chitooctaose 30 min | 3.87 | 7.12E-05 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | 4.47 | 1.69E-05 |
| GSE50526 | Col, WT, mock 9 h | Col, WT, A. brassicicola 9 h | 5.41 | 5.08E-07 |
| GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | 1.84 | 6.33E-07 |
| GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | 2.32 | 2.72E-08 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | 3.16 | 8.03E-05 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- hrpS- 10 h | 2.61 | 8.43E-03 |
| GSE5520 | Col, WT, control 24 h | Col, WT, PstDC3000 24 h | 1.96 | 1.77E-02 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | 2.00 | 2.81E-10 |
| GSE56094 | Col, WT, control 10 h | Col, WT, hrpA- 10 h | 1.68 | 4.56E-07 |
| GSE56094 | Col, WT, control 11 h | Col, WT, PstDC3000 11 h | 1.74 | 3.46E-08 |
| GSE56094 | Col, WT, control 11 h | Col, WT, hrpA- 11 h | 1.77 | 9.62E-08 |
| GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 1.54 | 8.95E-07 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | 2.01 | 2.73E-10 |
| GSE56094 | Col, WT, control 4 h | Col, WT, PstDC3000 4 h | 1.71 | 6.08E-07 |
| GSE56094 | Col, WT, control 7 h | Col, WT, hrpA- 7 h | 1.74 | 4.42E-07 |
| GSE56094 | Col, WT, control 8 h | Col, WT, hrpA- 8 h | 1.61 | 9.84E-07 |
| GSE5615 | Col, WT, GST 4 h | Col, WT, GST+NPP1 4 h | 1.80 | 3.51E-05 |
| GSE5615 | Col, WT, water 4 h | Col, WT, Flg22 4 h | 2.11 | 1.77E-06 |
| GSE5615 | Col, WT, water 4 h | Col, WT, HrpZ 4 h | 3.51 | 5.57E-11 |
| GSE5616 | Col, WT, water 12 h | Col, WT, P. infestans 12 h | 2.28 | 9.12E-05 |
| GSE5616 | Col, WT, water 6 h | Col, WT, P. infestans 6 h | 2.28 | 3.67E-05 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | 4.81 | 1.61E-02 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | 3.47 | 8.28E-06 |
| GSE8319 | Col, WT, control | Col, WT, chitooctaose 30 min | 2.42 | 1.99E-14 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h | 4.12 | 4.06E-05 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | 4.23 | 9.60E-05 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min | 2.23 | 5.21E-03 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 2-4 h | 3.58 | 1.51E-04 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 6 h | 4.18 | 1.22E-04 |
| GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 90-105 min | 1.78 | 5.32E-03 |
Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.