gene detail

Gene description

TAIR ID: AT5G59780

Short description: myb domain protein 59

Pathogen responsiveness: -0.11

General responsiveness: 0.93

Orthologous

Rice:

OS11G0700500

Maize:

GRMZM2G047626

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, response to gibberellin, cell differentiation, response to ethylene, regulation of transcription from RNA polymerase II promoter, transcription, response to chitin, response to cadmium ion, response to salicylic acid, response to jasmonic acid

GO cellular component

nucleus

GO molecular function

transcription regulatory region DNA binding, sequence-specific DNA binding, RNA polymerase II transcription factor activity, transcription factor activity, RNA polymerase II transcription factor recruiting

Protein domain

Pfam	PF00249, Myb-like DNA-binding domain
SMART	SM00717, SANT

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT5G11260, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

17 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	-2.16	6.35E-03
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-1.60	3.53E-02
GSE17464	Laer, control	Laer, Flg22 1 h	-2.41	7.06E-04
GSE17464	Laer, control	Laer, Flg22 2 h	-1.65	1.81E-02
GSE17464	Penta, control	Penta, Flg22 2 h	-3.07	1.95E-05
GSE17464	Penta, control	Penta, Flg22 2 h	-2.12	2.39E-03
GSE2169	Col, WT, water	Col, WT, chitin 30 min	-2.70	4.40E-09
GSE2169	Col, rre1, water	Col, rre1, chitin 30 min	-2.46	1.63E-08
GSE2169	Col, rre2, water	Col, rre2, chitin 30 min	-2.42	1.99E-08
GSE2538	Col, WT, control	Col, WT, crab shell chitin 30 min	-1.91	6.94E-06
GSE2538	Col, WT, control	Col, WT, purified chitin octamer 30 min	-1.88	8.69E-06
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.60	1.05E-07
GSE4746	Col, WT, water 30 min	Col, WT, chitooctaose 30 min	-1.58	2.07E-04
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.38	2.17E-04
GSE5520	Col, WT, control 10 h	Col, WT, Cor- hrpS- 10 h	-1.57	4.33E-02
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.76	5.83E-04
GSE8319	Col, WT, control	Col, WT, chitooctaose 30 min	-2.30	3.10E-13