Gene: AT5G59570
     

Gene description


TAIR ID: AT5G59570

Short description: Homeodomain-like superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, circadian rhythm, transcription, regulation of flower development


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, DNA binding


Protein domain


PfamPF00249, Myb-like DNA-binding domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G51600, AT5G41315

Target:
AT2G46830

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


13 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.542.09E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.697.86E-03
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.623.88E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.776.57E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.592.43E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.493.10E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.671.13E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.661.03E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.921.02E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.521.13E-09
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.675.81E-16
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.641.78E-15
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.531.35E-13






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.