gene detail

Gene description

TAIR ID: AT5G54490

Short description: pinoid-binding protein 1

Pathogen responsiveness: 1.54

General responsiveness: 2.20

Orthologous

Rice: No orthologous gene

Maize:

Wheat:

GO biological process

response to auxin

GO cellular component

nucleus

GO molecular function

calcium ion binding, protein binding

Protein domain

Pfam	PF13833, EF-hand domain pair

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT2G47190

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

Differentially expressed condition

51 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	4.65	4.12E-07
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	4.43	1.12E-04
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	4.35	1.09E-04
GSE17464	Laer, control	Laer, Flg22 1 h	4.29	3.25E-07
GSE4746	Col, WT, water 30 min	Col, WT, chitooctaose 30 min	4.07	4.90E-05
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	3.93	7.22E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 2-4 h	3.77	1.47E-04
GSE17464	Penta, control	Penta, Flg22 2 h	3.73	4.87E-06
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	3.61	8.37E-10
GSE8319	Col, WT, control	Col, WT, chitooctaose 30 min	3.59	1.86E-15

Showing 1 to 10 of 51 entries