Gene: AT5G54490
     

Gene description


TAIR ID: AT5G54490

Short description: pinoid-binding protein 1

Pathogen responsiveness: 1.54

General responsiveness: 2.20

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G062283  

Wheat:

TAAFFX.25948.1.S1_AT  


GO biological process


response to auxin


GO cellular component


nucleus


GO molecular function


calcium ion binding, protein binding


Protein domain


PfamPF13833, EF-hand domain pair

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT2G47190

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


51 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h2.975.83E-09
GSE12856Col, ataf1, controlCol, ataf1, Bg h3.618.37E-10
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d2.055.07E-06
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min3.214.57E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 30 min2.752.66E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min1.804.65E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h2.161.56E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h1.843.15E-02
GSE17464Laer, controlLaer, Flg22 1 h4.293.25E-07
GSE17464Laer, controlLaer, Flg22 2 h2.765.45E-04
GSE17464Penta, controlPenta, Flg22 2 h3.734.87E-06
GSE17464Penta, controlPenta, Flg22 2 h2.803.99E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.853.89E-03
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.621.07E-02
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h1.773.12E-11
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h3.164.90E-06
GSE2169Col, WT, waterCol, WT, chitin 30 min2.338.49E-08
GSE2169Col, rre1, waterCol, rre1, chitin 30 min3.047.13E-10
GSE2169Col, rre2, waterCol, rre2, chitin 30 min2.931.39E-09
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.993.64E-06
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min3.385.16E-07
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min3.159.79E-07
GSE26206Col, WT, controlCol, WT, R.solani_AG2_1 7 d2.221.90E-04
GSE26206Col, WT, controlCol, WT, R.solani_AG8 7 d2.395.77E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-1.671.76E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-1.853.88E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.641.45E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.653.04E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.576.71E-06
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min4.074.90E-05
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h2.529.26E-04
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h4.654.12E-07
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.182.57E-07
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.827.93E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.611.12E-03
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h1.625.45E-05
GSE5615Col, WT, water 1 hCol, WT, Flg22 1 h1.591.49E-04
GSE5615Col, WT, water 1 hCol, WT, HrpZ 1 h2.043.83E-06
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.539.10E-09
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h2.916.63E-06
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h3.431.00E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.631.52E-03
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 AvrRpm1 4 h1.683.91E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.039.58E-04
GSE73351Ws-4, map65_3, controlWs-4, map65_3, H.ara Emwa1 3 d2.126.27E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min3.591.86E-15
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h3.937.22E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h4.351.09E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min2.513.52E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h3.771.47E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h4.431.12E-04






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