Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G54490

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002376: immune system process0.00E+00
2GO:0010200: response to chitin1.03E-14
3GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.72E-05
4GO:0042742: defense response to bacterium1.01E-04
5GO:0001944: vasculature development1.32E-04
6GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening1.68E-04
7GO:0034051: negative regulation of plant-type hypersensitive response1.68E-04
8GO:0000302: response to reactive oxygen species2.32E-04
9GO:0009617: response to bacterium2.74E-04
10GO:0010508: positive regulation of autophagy3.33E-04
11GO:0002238: response to molecule of fungal origin5.22E-04
12GO:0009759: indole glucosinolate biosynthetic process5.22E-04
13GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response6.22E-04
14GO:0006979: response to oxidative stress7.18E-04
15GO:0070370: cellular heat acclimation7.28E-04
16GO:0043090: amino acid import7.28E-04
17GO:0043068: positive regulation of programmed cell death8.37E-04
18GO:0009061: anaerobic respiration8.37E-04
19GO:0010120: camalexin biosynthetic process9.50E-04
20GO:0030968: endoplasmic reticulum unfolded protein response9.50E-04
21GO:0043562: cellular response to nitrogen levels9.50E-04
22GO:0022900: electron transport chain9.50E-04
23GO:0051865: protein autoubiquitination1.07E-03
24GO:2000280: regulation of root development1.19E-03
25GO:0030042: actin filament depolymerization1.19E-03
26GO:0055062: phosphate ion homeostasis1.31E-03
27GO:0009682: induced systemic resistance1.44E-03
28GO:0052544: defense response by callose deposition in cell wall1.44E-03
29GO:0012501: programmed cell death1.58E-03
30GO:0034605: cellular response to heat1.86E-03
31GO:0070588: calcium ion transmembrane transport2.01E-03
32GO:0010053: root epidermal cell differentiation2.01E-03
33GO:0009969: xyloglucan biosynthetic process2.01E-03
34GO:0006952: defense response2.35E-03
35GO:0006511: ubiquitin-dependent protein catabolic process2.46E-03
36GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.49E-03
37GO:0007166: cell surface receptor signaling pathway2.54E-03
38GO:0009814: defense response, incompatible interaction2.80E-03
39GO:0071456: cellular response to hypoxia2.80E-03
40GO:0009625: response to insect2.97E-03
41GO:0010091: trichome branching3.15E-03
42GO:0010197: polar nucleus fusion3.69E-03
43GO:0006468: protein phosphorylation4.21E-03
44GO:0010193: response to ozone4.26E-03
45GO:0001666: response to hypoxia5.47E-03
46GO:0009816: defense response to bacterium, incompatible interaction5.69E-03
47GO:0009832: plant-type cell wall biogenesis6.80E-03
48GO:0048527: lateral root development7.27E-03
49GO:0010119: regulation of stomatal movement7.27E-03
50GO:0010043: response to zinc ion7.27E-03
51GO:0006865: amino acid transport7.51E-03
52GO:0006351: transcription, DNA-templated7.56E-03
53GO:0006355: regulation of transcription, DNA-templated7.78E-03
54GO:0009873: ethylene-activated signaling pathway8.04E-03
55GO:0051707: response to other organism9.25E-03
56GO:0009644: response to high light intensity9.77E-03
57GO:0009737: response to abscisic acid1.06E-02
58GO:0006486: protein glycosylation1.14E-02
59GO:0051603: proteolysis involved in cellular protein catabolic process1.17E-02
60GO:0010224: response to UV-B1.17E-02
61GO:0051301: cell division1.21E-02
62GO:0009845: seed germination1.81E-02
63GO:0009651: response to salt stress1.89E-02
64GO:0009451: RNA modification2.19E-02
65GO:0009739: response to gibberellin2.34E-02
66GO:0009409: response to cold3.04E-02
67GO:0006970: response to osmotic stress3.10E-02
68GO:0009723: response to ethylene3.27E-02
69GO:0080167: response to karrikin3.43E-02
70GO:0046686: response to cadmium ion3.50E-02
71GO:0045454: cell redox homeostasis3.90E-02
72GO:0009751: response to salicylic acid4.48E-02
73GO:0009408: response to heat4.53E-02
74GO:0009753: response to jasmonic acid4.76E-02
RankGO TermAdjusted P value
1GO:0004298: threonine-type endopeptidase activity1.60E-06
2GO:0031127: alpha-(1,2)-fucosyltransferase activity3.90E-05
3GO:0001047: core promoter binding9.72E-05
4GO:0035529: NADH pyrophosphatase activity2.48E-04
5GO:0047631: ADP-ribose diphosphatase activity4.25E-04
6GO:0008233: peptidase activity4.96E-04
7GO:0000210: NAD+ diphosphatase activity5.22E-04
8GO:0005509: calcium ion binding6.29E-04
9GO:0044212: transcription regulatory region DNA binding7.10E-04
10GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity7.28E-04
11GO:0008121: ubiquinol-cytochrome-c reductase activity7.28E-04
12GO:0008417: fucosyltransferase activity1.07E-03
13GO:0004713: protein tyrosine kinase activity1.31E-03
14GO:0004129: cytochrome-c oxidase activity1.44E-03
15GO:0005262: calcium channel activity1.72E-03
16GO:0005388: calcium-transporting ATPase activity1.72E-03
17GO:0000175: 3'-5'-exoribonuclease activity1.72E-03
18GO:0004535: poly(A)-specific ribonuclease activity1.86E-03
19GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.08E-03
20GO:0008408: 3'-5' exonuclease activity2.64E-03
21GO:0004540: ribonuclease activity2.64E-03
22GO:0005516: calmodulin binding2.80E-03
23GO:0061630: ubiquitin protein ligase activity4.45E-03
24GO:0004222: metalloendopeptidase activity7.04E-03
25GO:0003700: transcription factor activity, sequence-specific DNA binding7.12E-03
26GO:0004674: protein serine/threonine kinase activity7.86E-03
27GO:0000987: core promoter proximal region sequence-specific DNA binding7.99E-03
28GO:0004712: protein serine/threonine/tyrosine kinase activity8.24E-03
29GO:0043565: sequence-specific DNA binding8.32E-03
30GO:0015293: symporter activity1.00E-02
31GO:0051287: NAD binding1.06E-02
32GO:0015171: amino acid transmembrane transporter activity1.23E-02
33GO:0003779: actin binding1.43E-02
34GO:0016746: transferase activity, transferring acyl groups1.49E-02
35GO:0016301: kinase activity1.62E-02
36GO:0046872: metal ion binding2.26E-02
37GO:0004842: ubiquitin-protein transferase activity3.11E-02
38GO:0043531: ADP binding3.14E-02
39GO:0004672: protein kinase activity3.30E-02
40GO:0005515: protein binding3.60E-02
41GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.90E-02
42GO:0004871: signal transducer activity4.03E-02
43GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.21E-02
RankGO TermAdjusted P value
1GO:0005839: proteasome core complex1.60E-06
2GO:0019773: proteasome core complex, alpha-subunit complex1.66E-05
3GO:0030014: CCR4-NOT complex3.90E-05
4GO:0000502: proteasome complex5.88E-05
5GO:0005751: mitochondrial respiratory chain complex IV1.68E-04
6GO:0031012: extracellular matrix1.72E-03
7GO:0005750: mitochondrial respiratory chain complex III1.86E-03
8GO:0015629: actin cytoskeleton2.97E-03
9GO:0032580: Golgi cisterna membrane4.85E-03
10GO:0005643: nuclear pore6.58E-03
11GO:0009706: chloroplast inner membrane1.46E-02
12GO:0005886: plasma membrane1.60E-02
13GO:0031225: anchored component of membrane1.73E-02
14GO:0005623: cell1.75E-02
15GO:0005622: intracellular1.97E-02
Gene type



Gene DE type