Gene: AT5G54470
     

Gene description


TAIR ID: AT5G54470

Short description: B-box type zinc finger family protein

Pathogen responsiveness: -0.65

General responsiveness: -0.45

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, pollen development, response to cold


GO cellular component


intracellular, nucleus


GO molecular function


zinc ion binding, protein binding, transcription factor activity, sequence-specific DNA binding


Protein domain


SMARTSM00336, BBOX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36920, AT2G20180, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 7

click to view PPI network

Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-3.442.24E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-4.142.10E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-3.086.46E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-3.223.15E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-2.461.10E-06
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-2.861.40E-07






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