gene detail

Gene description

TAIR ID: AT5G54170

Short description: Polyketide cyclase/dehydrase and lipid transport superfamily protein

Pathogen responsiveness: -0.88

General responsiveness: 0.16

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to wounding

GO cellular component

unkown

GO molecular function

unkown

Protein domain

Pfam	PF01852, START domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G38250

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.10	5.74E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.65	3.29E-08
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.03	1.33E-09
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	1.72	2.50E-07
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.70	5.07E-05
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	1.54	5.25E-04
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.83	1.63E-05
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.29	7.82E-08