Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G54170

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006792: regulation of sulfur utilization0.00E+00
2GO:0009751: response to salicylic acid9.31E-08
3GO:0010438: cellular response to sulfur starvation4.42E-07
4GO:0030162: regulation of proteolysis1.96E-06
5GO:0010439: regulation of glucosinolate biosynthetic process1.96E-06
6GO:0010200: response to chitin2.09E-06
7GO:0042542: response to hydrogen peroxide2.98E-06
8GO:0009753: response to jasmonic acid5.23E-06
9GO:0051973: positive regulation of telomerase activity1.21E-05
10GO:0080164: regulation of nitric oxide metabolic process1.21E-05
11GO:0055063: sulfate ion homeostasis1.21E-05
12GO:0046500: S-adenosylmethionine metabolic process1.21E-05
13GO:2000022: regulation of jasmonic acid mediated signaling pathway2.22E-05
14GO:0071497: cellular response to freezing3.21E-05
15GO:0051592: response to calcium ion3.21E-05
16GO:0009733: response to auxin7.26E-05
17GO:0009743: response to carbohydrate8.79E-05
18GO:0046345: abscisic acid catabolic process1.22E-04
19GO:0006544: glycine metabolic process1.59E-04
20GO:0006357: regulation of transcription from RNA polymerase II promoter1.76E-04
21GO:0006563: L-serine metabolic process1.98E-04
22GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.02E-04
23GO:0009612: response to mechanical stimulus2.39E-04
24GO:0009738: abscisic acid-activated signaling pathway2.50E-04
25GO:0009611: response to wounding2.69E-04
26GO:0010038: response to metal ion2.82E-04
27GO:0048574: long-day photoperiodism, flowering3.73E-04
28GO:0044030: regulation of DNA methylation3.73E-04
29GO:2000031: regulation of salicylic acid mediated signaling pathway3.73E-04
30GO:0035999: tetrahydrofolate interconversion4.69E-04
31GO:1903507: negative regulation of nucleic acid-templated transcription5.71E-04
32GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process6.14E-04
33GO:0030154: cell differentiation7.18E-04
34GO:0010540: basipetal auxin transport7.31E-04
35GO:0034605: cellular response to heat7.31E-04
36GO:0010167: response to nitrate7.88E-04
37GO:0009409: response to cold9.38E-04
38GO:0009723: response to ethylene9.60E-04
39GO:0040007: growth1.14E-03
40GO:0010182: sugar mediated signaling pathway1.40E-03
41GO:0010268: brassinosteroid homeostasis1.40E-03
42GO:0009646: response to absence of light1.47E-03
43GO:0016132: brassinosteroid biosynthetic process1.61E-03
44GO:0009737: response to abscisic acid1.64E-03
45GO:0006355: regulation of transcription, DNA-templated1.66E-03
46GO:0009639: response to red or far red light1.83E-03
47GO:0016125: sterol metabolic process1.83E-03
48GO:0001666: response to hypoxia2.06E-03
49GO:0009734: auxin-activated signaling pathway2.07E-03
50GO:0010411: xyloglucan metabolic process2.30E-03
51GO:0048527: lateral root development2.71E-03
52GO:0006865: amino acid transport2.80E-03
53GO:0045087: innate immune response2.89E-03
54GO:0009651: response to salt stress2.91E-03
55GO:0042546: cell wall biogenesis3.52E-03
56GO:0031347: regulation of defense response3.90E-03
57GO:0009909: regulation of flower development4.50E-03
58GO:0009414: response to water deprivation5.09E-03
59GO:0009553: embryo sac development5.23E-03
60GO:0006952: defense response5.49E-03
61GO:0007623: circadian rhythm7.79E-03
62GO:0046686: response to cadmium ion8.12E-03
63GO:0009739: response to gibberellin8.43E-03
64GO:0009658: chloroplast organization1.06E-02
65GO:0007165: signal transduction1.09E-02
66GO:0045454: cell redox homeostasis1.40E-02
67GO:0009408: response to heat1.62E-02
68GO:0009873: ethylene-activated signaling pathway1.95E-02
69GO:0009555: pollen development2.44E-02
70GO:0035556: intracellular signal transduction2.54E-02
71GO:0045893: positive regulation of transcription, DNA-templated2.69E-02
72GO:0042742: defense response to bacterium4.04E-02
73GO:0071555: cell wall organization4.04E-02
RankGO TermAdjusted P value
1GO:0003712: transcription cofactor activity1.19E-05
2GO:0004402: histone acetyltransferase activity3.32E-05
3GO:0010295: (+)-abscisic acid 8'-hydroxylase activity5.78E-05
4GO:0044212: transcription regulatory region DNA binding5.88E-05
5GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting8.72E-05
6GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.02E-04
7GO:0004372: glycine hydroxymethyltransferase activity1.59E-04
8GO:0010427: abscisic acid binding1.98E-04
9GO:0031625: ubiquitin protein ligase binding2.51E-04
10GO:0004864: protein phosphatase inhibitor activity5.20E-04
11GO:0043565: sequence-specific DNA binding8.68E-04
12GO:0003714: transcription corepressor activity9.02E-04
13GO:0004872: receptor activity1.54E-03
14GO:0016762: xyloglucan:xyloglucosyl transferase activity1.61E-03
15GO:0016798: hydrolase activity, acting on glycosyl bonds2.30E-03
16GO:0005516: calmodulin binding3.89E-03
17GO:0015171: amino acid transmembrane transporter activity4.50E-03
18GO:0030170: pyridoxal phosphate binding6.70E-03
19GO:0003700: transcription factor activity, sequence-specific DNA binding9.01E-03
20GO:0043531: ADP binding1.13E-02
21GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.98E-02
22GO:0005515: protein binding3.07E-02
23GO:0019825: oxygen binding3.14E-02
24GO:0005509: calcium ion binding3.81E-02
25GO:0003677: DNA binding3.86E-02
26GO:0005506: iron ion binding3.99E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0019005: SCF ubiquitin ligase complex9.66E-05
3GO:0015629: actin cytoskeleton1.14E-03
4GO:0005615: extracellular space8.43E-03
5GO:0048046: apoplast1.90E-02
6GO:0005634: nucleus2.44E-02
7GO:0031225: anchored component of membrane3.35E-02
8GO:0005737: cytoplasm3.81E-02
9GO:0009505: plant-type cell wall4.74E-02
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Gene type



Gene DE type