Gene: AT5G53980
     

Gene description


TAIR ID: AT5G53980

Short description: homeobox protein 52

Pathogen responsiveness: -0.63

General responsiveness: -0.34

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


transcription, DNA-templated, regulation of transcription, response to absence of light, response to blue light


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00046, Homeobox domain
SMARTSM00389, HOX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G18770, AT2G43010

Target:
none

Protein-protein interaction network


No Interactor


Coexpression network

GSE13739_EDS16_GO  view

Differentially expressed condition


8 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h4.761.85E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h3.131.87E-03
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h3.832.38E-04
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h4.137.20E-05
GSE37269Di2, WT, controlDi2, WT, TEV 21 d2.274.42E-02
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.211.41E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d2.209.52E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min-1.672.89E-10






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