Gene: AT5G53830
     

Gene description


TAIR ID: AT5G53830

Short description: VQ motif-containing protein

Pathogen responsiveness: 0.21

General responsiveness: -1.70

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


nucleus


GO molecular function


molecular_function


Protein domain


PfamPF05678, VQ motif

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


27 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min2.114.40E-02
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h1.729.67E-04
GSE17464Laer, controlLaer, Flg22 1 h2.011.69E-05
GSE17464Penta, controlPenta, Flg22 2 h2.611.06E-07
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.474.80E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h3.014.40E-07
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.602.65E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h3.148.17E-08
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h2.081.54E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.968.79E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.967.31E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.573.63E-08
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.003.05E-10
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.511.30E-02
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.315.26E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.967.63E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.782.53E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.614.10E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.683.39E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.889.57E-15
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.392.89E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.071.19E-08
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.024.50E-08
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h3.301.63E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.567.67E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.851.13E-07
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h1.781.14E-02






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