Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G53830

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:1902001: fatty acid transmembrane transport0.00E+00
3GO:2000630: positive regulation of miRNA metabolic process0.00E+00
4GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
5GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
6GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
7GO:0015690: aluminum cation transport0.00E+00
8GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
9GO:0009312: oligosaccharide biosynthetic process0.00E+00
10GO:0046865: terpenoid transport0.00E+00
11GO:2000636: positive regulation of primary miRNA processing0.00E+00
12GO:0010324: membrane invagination0.00E+00
13GO:0071456: cellular response to hypoxia6.95E-07
14GO:0010112: regulation of systemic acquired resistance3.50E-05
15GO:0009737: response to abscisic acid4.69E-05
16GO:0009751: response to salicylic acid5.11E-05
17GO:0051707: response to other organism6.16E-05
18GO:0060548: negative regulation of cell death1.03E-04
19GO:0045227: capsule polysaccharide biosynthetic process1.03E-04
20GO:0033358: UDP-L-arabinose biosynthetic process1.03E-04
21GO:0010150: leaf senescence1.21E-04
22GO:0002237: response to molecule of bacterial origin1.37E-04
23GO:0042742: defense response to bacterium1.50E-04
24GO:0006979: response to oxidative stress1.54E-04
25GO:0002238: response to molecule of fungal origin2.27E-04
26GO:0009643: photosynthetic acclimation2.27E-04
27GO:0006952: defense response2.73E-04
28GO:0009625: response to insect3.67E-04
29GO:0048508: embryonic meristem development4.18E-04
30GO:0015760: glucose-6-phosphate transport4.18E-04
31GO:0043547: positive regulation of GTPase activity4.18E-04
32GO:0019567: arabinose biosynthetic process4.18E-04
33GO:0015969: guanosine tetraphosphate metabolic process4.18E-04
34GO:0033306: phytol metabolic process4.18E-04
35GO:0009700: indole phytoalexin biosynthetic process4.18E-04
36GO:0009270: response to humidity4.18E-04
37GO:0050691: regulation of defense response to virus by host4.18E-04
38GO:0032491: detection of molecule of fungal origin4.18E-04
39GO:0042759: long-chain fatty acid biosynthetic process4.18E-04
40GO:0009968: negative regulation of signal transduction4.18E-04
41GO:1990542: mitochondrial transmembrane transport4.18E-04
42GO:0032107: regulation of response to nutrient levels4.18E-04
43GO:0042391: regulation of membrane potential5.05E-04
44GO:0010200: response to chitin5.45E-04
45GO:0010120: camalexin biosynthetic process6.03E-04
46GO:0010204: defense response signaling pathway, resistance gene-independent6.03E-04
47GO:0009749: response to glucose6.66E-04
48GO:0010193: response to ozone7.27E-04
49GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.52E-04
50GO:0015914: phospholipid transport9.05E-04
51GO:0010155: regulation of proton transport9.05E-04
52GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.05E-04
53GO:0080181: lateral root branching9.05E-04
54GO:0006024: glycosaminoglycan biosynthetic process9.05E-04
55GO:0055088: lipid homeostasis9.05E-04
56GO:0010115: regulation of abscisic acid biosynthetic process9.05E-04
57GO:0015908: fatty acid transport9.05E-04
58GO:0002240: response to molecule of oomycetes origin9.05E-04
59GO:0044419: interspecies interaction between organisms9.05E-04
60GO:0009945: radial axis specification9.05E-04
61GO:0015712: hexose phosphate transport9.05E-04
62GO:0010271: regulation of chlorophyll catabolic process9.05E-04
63GO:0051258: protein polymerization9.05E-04
64GO:0019725: cellular homeostasis9.05E-04
65GO:0015012: heparan sulfate proteoglycan biosynthetic process9.05E-04
66GO:0071668: plant-type cell wall assembly9.05E-04
67GO:0006032: chitin catabolic process9.91E-04
68GO:0050832: defense response to fungus1.37E-03
69GO:0015692: lead ion transport1.47E-03
70GO:0015695: organic cation transport1.47E-03
71GO:0015714: phosphoenolpyruvate transport1.47E-03
72GO:0080168: abscisic acid transport1.47E-03
73GO:1900055: regulation of leaf senescence1.47E-03
74GO:0010498: proteasomal protein catabolic process1.47E-03
75GO:0006954: inflammatory response1.47E-03
76GO:0034051: negative regulation of plant-type hypersensitive response1.47E-03
77GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.47E-03
78GO:0080163: regulation of protein serine/threonine phosphatase activity1.47E-03
79GO:0035436: triose phosphate transmembrane transport1.47E-03
80GO:0045793: positive regulation of cell size1.47E-03
81GO:0010186: positive regulation of cellular defense response1.47E-03
82GO:0009225: nucleotide-sugar metabolic process1.87E-03
83GO:0048194: Golgi vesicle budding2.13E-03
84GO:0010731: protein glutathionylation2.13E-03
85GO:0015696: ammonium transport2.13E-03
86GO:0051289: protein homotetramerization2.13E-03
87GO:0046513: ceramide biosynthetic process2.13E-03
88GO:0010116: positive regulation of abscisic acid biosynthetic process2.13E-03
89GO:0080147: root hair cell development2.31E-03
90GO:2000377: regulation of reactive oxygen species metabolic process2.31E-03
91GO:0006887: exocytosis2.72E-03
92GO:0006897: endocytosis2.72E-03
93GO:0016998: cell wall macromolecule catabolic process2.80E-03
94GO:0010109: regulation of photosynthesis2.86E-03
95GO:0072488: ammonium transmembrane transport2.86E-03
96GO:0015713: phosphoglycerate transport2.86E-03
97GO:1901141: regulation of lignin biosynthetic process2.86E-03
98GO:0006012: galactose metabolic process3.35E-03
99GO:0009611: response to wounding3.60E-03
100GO:0009435: NAD biosynthetic process3.66E-03
101GO:0034052: positive regulation of plant-type hypersensitive response3.66E-03
102GO:0009164: nucleoside catabolic process3.66E-03
103GO:0006470: protein dephosphorylation3.80E-03
104GO:0007166: cell surface receptor signaling pathway3.80E-03
105GO:0031347: regulation of defense response3.86E-03
106GO:0010256: endomembrane system organization4.52E-03
107GO:0033365: protein localization to organelle4.52E-03
108GO:0009414: response to water deprivation4.52E-03
109GO:0006574: valine catabolic process4.52E-03
110GO:0009759: indole glucosinolate biosynthetic process4.52E-03
111GO:0006468: protein phosphorylation4.70E-03
112GO:0009753: response to jasmonic acid4.71E-03
113GO:0009646: response to absence of light4.95E-03
114GO:0071470: cellular response to osmotic stress5.46E-03
115GO:0042372: phylloquinone biosynthetic process5.46E-03
116GO:0045926: negative regulation of growth5.46E-03
117GO:0009942: longitudinal axis specification5.46E-03
118GO:0009626: plant-type hypersensitive response5.94E-03
119GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway6.45E-03
120GO:0071446: cellular response to salicylic acid stimulus6.45E-03
121GO:1900056: negative regulation of leaf senescence6.45E-03
122GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.45E-03
123GO:0050829: defense response to Gram-negative bacterium6.45E-03
124GO:1902074: response to salt6.45E-03
125GO:0006904: vesicle docking involved in exocytosis7.34E-03
126GO:0010928: regulation of auxin mediated signaling pathway7.50E-03
127GO:0009787: regulation of abscisic acid-activated signaling pathway7.50E-03
128GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.50E-03
129GO:0009819: drought recovery7.50E-03
130GO:0043068: positive regulation of programmed cell death7.50E-03
131GO:0031540: regulation of anthocyanin biosynthetic process7.50E-03
132GO:0009723: response to ethylene7.53E-03
133GO:2000031: regulation of salicylic acid mediated signaling pathway8.61E-03
134GO:0010208: pollen wall assembly8.61E-03
135GO:0006950: response to stress9.73E-03
136GO:0007338: single fertilization9.78E-03
137GO:0006098: pentose-phosphate shunt9.78E-03
138GO:0019432: triglyceride biosynthetic process9.78E-03
139GO:0046916: cellular transition metal ion homeostasis9.78E-03
140GO:0048268: clathrin coat assembly1.10E-02
141GO:0010380: regulation of chlorophyll biosynthetic process1.10E-02
142GO:0008202: steroid metabolic process1.10E-02
143GO:0009407: toxin catabolic process1.19E-02
144GO:0009870: defense response signaling pathway, resistance gene-dependent1.23E-02
145GO:0010119: regulation of stomatal movement1.25E-02
146GO:0019684: photosynthesis, light reaction1.36E-02
147GO:0009682: induced systemic resistance1.36E-02
148GO:0009089: lysine biosynthetic process via diaminopimelate1.36E-02
149GO:0009867: jasmonic acid mediated signaling pathway1.37E-02
150GO:0000266: mitochondrial fission1.50E-02
151GO:0055046: microgametogenesis1.64E-02
152GO:2000028: regulation of photoperiodism, flowering1.64E-02
153GO:0018107: peptidyl-threonine phosphorylation1.64E-02
154GO:0009617: response to bacterium1.75E-02
155GO:0009266: response to temperature stimulus1.79E-02
156GO:0080188: RNA-directed DNA methylation1.94E-02
157GO:0010167: response to nitrate1.94E-02
158GO:0046688: response to copper ion1.94E-02
159GO:0009636: response to toxic substance1.99E-02
160GO:0006855: drug transmembrane transport2.07E-02
161GO:0009863: salicylic acid mediated signaling pathway2.25E-02
162GO:0006486: protein glycosylation2.39E-02
163GO:0006825: copper ion transport2.42E-02
164GO:0006874: cellular calcium ion homeostasis2.42E-02
165GO:0009814: defense response, incompatible interaction2.76E-02
166GO:0031348: negative regulation of defense response2.76E-02
167GO:0009561: megagametogenesis3.11E-02
168GO:0042127: regulation of cell proliferation3.11E-02
169GO:0009306: protein secretion3.11E-02
170GO:0009620: response to fungus3.11E-02
171GO:0080167: response to karrikin3.17E-02
172GO:0070417: cellular response to cold3.30E-02
173GO:0009624: response to nematode3.40E-02
174GO:0042631: cellular response to water deprivation3.49E-02
175GO:0000271: polysaccharide biosynthetic process3.49E-02
176GO:0000413: protein peptidyl-prolyl isomerization3.49E-02
177GO:0018105: peptidyl-serine phosphorylation3.50E-02
178GO:0045489: pectin biosynthetic process3.68E-02
179GO:0006885: regulation of pH3.68E-02
180GO:0010182: sugar mediated signaling pathway3.68E-02
181GO:0015979: photosynthesis3.74E-02
182GO:0035556: intracellular signal transduction3.82E-02
183GO:0000398: mRNA splicing, via spliceosome3.92E-02
184GO:0071554: cell wall organization or biogenesis4.27E-02
185GO:0002229: defense response to oomycetes4.27E-02
186GO:0000302: response to reactive oxygen species4.27E-02
187GO:0007264: small GTPase mediated signal transduction4.48E-02
188GO:0019761: glucosinolate biosynthetic process4.48E-02
189GO:0009845: seed germination4.59E-02
190GO:0009567: double fertilization forming a zygote and endosperm4.89E-02
191GO:0009790: embryo development4.95E-02
RankGO TermAdjusted P value
1GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
2GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
3GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
4GO:0008734: L-aspartate oxidase activity0.00E+00
5GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
6GO:0005212: structural constituent of eye lens0.00E+00
7GO:0004568: chitinase activity6.00E-05
8GO:0050373: UDP-arabinose 4-epimerase activity1.03E-04
9GO:0047631: ADP-ribose diphosphatase activity1.59E-04
10GO:0030552: cAMP binding1.62E-04
11GO:0030553: cGMP binding1.62E-04
12GO:0000210: NAD+ diphosphatase activity2.27E-04
13GO:0005216: ion channel activity2.53E-04
14GO:0004012: phospholipid-translocating ATPase activity3.06E-04
15GO:0003978: UDP-glucose 4-epimerase activity3.06E-04
16GO:2001227: quercitrin binding4.18E-04
17GO:0019707: protein-cysteine S-acyltransferase activity4.18E-04
18GO:2001147: camalexin binding4.18E-04
19GO:0015245: fatty acid transporter activity4.18E-04
20GO:0010285: L,L-diaminopimelate aminotransferase activity4.18E-04
21GO:0016301: kinase activity4.40E-04
22GO:0005249: voltage-gated potassium channel activity5.05E-04
23GO:0030551: cyclic nucleotide binding5.05E-04
24GO:0019901: protein kinase binding6.66E-04
25GO:0047364: desulfoglucosinolate sulfotransferase activity9.05E-04
26GO:0015152: glucose-6-phosphate transmembrane transporter activity9.05E-04
27GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity9.05E-04
28GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity9.05E-04
29GO:0032934: sterol binding9.05E-04
30GO:0015036: disulfide oxidoreductase activity9.05E-04
31GO:0048531: beta-1,3-galactosyltransferase activity9.05E-04
32GO:0008728: GTP diphosphokinase activity9.05E-04
33GO:0050291: sphingosine N-acyltransferase activity9.05E-04
34GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.98E-04
35GO:0008559: xenobiotic-transporting ATPase activity1.14E-03
36GO:0008375: acetylglucosaminyltransferase activity1.32E-03
37GO:0071917: triose-phosphate transmembrane transporter activity1.47E-03
38GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.47E-03
39GO:0004324: ferredoxin-NADP+ reductase activity1.47E-03
40GO:0016531: copper chaperone activity1.47E-03
41GO:0032403: protein complex binding1.47E-03
42GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.48E-03
43GO:0017077: oxidative phosphorylation uncoupler activity2.13E-03
44GO:0035529: NADH pyrophosphatase activity2.13E-03
45GO:0001046: core promoter sequence-specific DNA binding2.31E-03
46GO:0005516: calmodulin binding2.49E-03
47GO:0019706: protein-cysteine S-palmitoyltransferase activity2.80E-03
48GO:0004930: G-protein coupled receptor activity2.86E-03
49GO:0015120: phosphoglycerate transmembrane transporter activity2.86E-03
50GO:0004499: N,N-dimethylaniline monooxygenase activity3.64E-03
51GO:0005496: steroid binding3.66E-03
52GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.66E-03
53GO:0005509: calcium ion binding3.99E-03
54GO:0008519: ammonium transmembrane transporter activity4.52E-03
55GO:0016757: transferase activity, transferring glycosyl groups5.02E-03
56GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides5.46E-03
57GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.46E-03
58GO:0102391: decanoate--CoA ligase activity5.46E-03
59GO:0005261: cation channel activity5.46E-03
60GO:0004144: diacylglycerol O-acyltransferase activity5.46E-03
61GO:0004656: procollagen-proline 4-dioxygenase activity5.46E-03
62GO:0004674: protein serine/threonine kinase activity5.97E-03
63GO:0043295: glutathione binding6.45E-03
64GO:0004467: long-chain fatty acid-CoA ligase activity6.45E-03
65GO:0043565: sequence-specific DNA binding6.64E-03
66GO:0005544: calcium-dependent phospholipid binding7.50E-03
67GO:0004033: aldo-keto reductase (NADP) activity7.50E-03
68GO:0004708: MAP kinase kinase activity7.50E-03
69GO:0004714: transmembrane receptor protein tyrosine kinase activity7.50E-03
70GO:0008142: oxysterol binding8.61E-03
71GO:0005524: ATP binding1.04E-02
72GO:0047617: acyl-CoA hydrolase activity1.10E-02
73GO:0005545: 1-phosphatidylinositol binding1.23E-02
74GO:0015020: glucuronosyltransferase activity1.23E-02
75GO:0004864: protein phosphatase inhibitor activity1.23E-02
76GO:0004722: protein serine/threonine phosphatase activity1.27E-02
77GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.28E-02
78GO:0050661: NADP binding1.56E-02
79GO:0005315: inorganic phosphate transmembrane transporter activity1.64E-02
80GO:0004364: glutathione transferase activity1.70E-02
81GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.89E-02
82GO:0008146: sulfotransferase activity1.94E-02
83GO:0004970: ionotropic glutamate receptor activity1.94E-02
84GO:0005217: intracellular ligand-gated ion channel activity1.94E-02
85GO:0004190: aspartic-type endopeptidase activity1.94E-02
86GO:0051287: NAD binding2.15E-02
87GO:0031418: L-ascorbic acid binding2.25E-02
88GO:0003954: NADH dehydrogenase activity2.25E-02
89GO:0033612: receptor serine/threonine kinase binding2.59E-02
90GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.76E-02
91GO:0004497: monooxygenase activity3.17E-02
92GO:0005451: monovalent cation:proton antiporter activity3.49E-02
93GO:0030276: clathrin binding3.68E-02
94GO:0005199: structural constituent of cell wall3.68E-02
95GO:0015299: solute:proton antiporter activity3.87E-02
96GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.96E-02
97GO:0016758: transferase activity, transferring hexosyl groups4.14E-02
98GO:0004197: cysteine-type endopeptidase activity4.48E-02
99GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.52E-02
100GO:0015385: sodium:proton antiporter activity4.68E-02
101GO:0016740: transferase activity4.70E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane1.73E-09
2GO:0005886: plasma membrane6.50E-07
3GO:0005794: Golgi apparatus1.55E-05
4GO:0000813: ESCRT I complex1.59E-04
5GO:0000138: Golgi trans cisterna4.18E-04
6GO:0031304: intrinsic component of mitochondrial inner membrane9.05E-04
7GO:0005901: caveola9.05E-04
8GO:0031314: extrinsic component of mitochondrial inner membrane9.05E-04
9GO:0008287: protein serine/threonine phosphatase complex1.47E-03
10GO:0009530: primary cell wall1.47E-03
11GO:0070062: extracellular exosome2.13E-03
12GO:0005802: trans-Golgi network2.86E-03
13GO:0000164: protein phosphatase type 1 complex3.66E-03
14GO:0005789: endoplasmic reticulum membrane4.38E-03
15GO:0000145: exocyst6.08E-03
16GO:0032580: Golgi cisterna membrane6.90E-03
17GO:0015030: Cajal body1.10E-02
18GO:0000325: plant-type vacuole1.25E-02
19GO:0005777: peroxisome1.44E-02
20GO:0005783: endoplasmic reticulum1.59E-02
21GO:0005578: proteinaceous extracellular matrix1.64E-02
22GO:0031012: extracellular matrix1.64E-02
23GO:0005795: Golgi stack1.94E-02
24GO:0005769: early endosome2.09E-02
25GO:0005758: mitochondrial intermembrane space2.25E-02
26GO:0005887: integral component of plasma membrane2.38E-02
27GO:0005741: mitochondrial outer membrane2.59E-02
28GO:0005905: clathrin-coated pit2.59E-02
29GO:0005681: spliceosomal complex2.83E-02
30GO:0005768: endosome3.15E-02
31GO:0030136: clathrin-coated vesicle3.30E-02
32GO:0005770: late endosome3.68E-02
33GO:0005743: mitochondrial inner membrane4.68E-02
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Gene type



Gene DE type