Gene: AT5G53490
     

Gene description


TAIR ID: AT5G53490

Short description: Tetratricopeptide repeat (TPR)-like superfamily protein

Pathogen responsiveness: 0.55

General responsiveness: 2.56

Orthologous


Rice:

OS10G0502000  

Maize:

GRMZM2G436710  

Wheat: No orthologous gene

GO biological process


biological_process


GO cellular component


thylakoid, chloroplast, chloroplast thylakoid membrane, chloroplast stroma, chloroplast thylakoid lumen, thylakoid lumen, integral component of membrane, chloroplast thylakoid, extracellular region


GO molecular function


protein binding


Protein domain


PfamPF13599, Pentapeptide repeats (9 copies)

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G18770

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


33 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.564.01E-07
GSE17464Laer, controlLaer, Flg22 2 h-1.595.14E-03
GSE17464Penta, controlPenta, Flg22 2 h-1.851.19E-03
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-2.041.07E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-2.461.25E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-2.264.06E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.577.53E-10
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.012.58E-08
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.611.89E-06
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.931.51E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.833.44E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.794.07E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.142.83E-14
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-3.129.26E-08
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-1.842.02E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.865.23E-09
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-3.151.02E-16
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.836.68E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.676.29E-13
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.654.90E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.563.33E-12
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.682.87E-13
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h-1.651.22E-05
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-1.572.07E-05
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.971.27E-07
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-1.553.69E-05
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.565.73E-12
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-2.131.67E-08
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-2.463.63E-11
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.811.16E-06
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.902.49E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.991.33E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.202.50E-02






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