Gene: AT5G49360
     

Gene description


TAIR ID: AT5G49360

Short description: beta-xylosidase 1

Pathogen responsiveness: 0.64

General responsiveness: 1.73

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


seed coat development, carbohydrate metabolic process


GO cellular component


apoplast, plant-type cell wall, extracellular region, proteinaceous extracellular matrix


GO molecular function


hydrolase activity, hydrolyzing O-glycosyl compounds, alpha-L-arabinofuranosidase activity


Protein domain


PfamPF14310, Fibronectin type III-like domain
PfamPF00933, Glycosyl hydrolase family 3 N terminal domain
PfamPF01915, Glycosyl hydrolase family 3 C-terminal domain
SMARTSM01217, Fn3_like

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT4G36920, AT1G24260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


25 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 2 h-2.221.25E-02
GSE17464Penta, controlPenta, Flg22 2 h-2.359.64E-03
GSE17464Penta, controlPenta, Flg22 2 h-3.193.75E-04
GSE2169Col, rre1, waterCol, rre1, chitin 30 min1.515.41E-03
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h-2.131.37E-04
GSE26206Col, WT, controlCol, WT, R.solani_AG2_1 7 d-1.681.48E-03
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.741.02E-09
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d2.611.11E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.262.50E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.813.01E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.645.79E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.531.30E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-4.453.29E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-3.211.01E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-3.221.23E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.882.35E-10
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-2.701.93E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.781.39E-06
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h-1.781.04E-03
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-2.211.89E-05
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h-1.875.50E-04
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.162.74E-05
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-1.553.42E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-3.908.19E-04
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 AvrRpm1 4 h-1.642.91E-03






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