Gene: AT5G49215
Gene description
TAIR ID: AT5G49215
Short description: Pectin lyase-like superfamily protein
Pathogen responsiveness: NA
General responsiveness: NA
Orthologous
Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene
GO biological process
carbohydrate metabolic process
GO cellular component
extracellular region
GO molecular function
polygalacturonase activity, lyase activity
Protein domain
| Pfam | PF12708, Pectate lyase superfamily protein |
| Pfam | PF00295, Glycosyl hydrolases family 28 |
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
8 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -1.96 | 4.86E-12 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -2.15 | 1.97E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -2.56 | 1.58E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -2.33 | 4.09E-13 |
| GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -1.73 | 4.72E-08 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -2.15 | 8.68E-10 |
| GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | -1.68 | 9.84E-10 |
| GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | -1.71 | 6.54E-10 |
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