Gene: AT5G48250
     

Gene description


TAIR ID: AT5G48250

Short description: B-box type zinc finger protein with CCT domain

Pathogen responsiveness: -0.40

General responsiveness: -0.20

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


nucleus, plasma membrane


GO molecular function


transcription factor activity, sequence-specific DNA binding, protein binding, zinc ion binding


Protein domain


PfamPF06203, CCT motif
SMARTSM00336, BBOX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h4.025.05E-14
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h4.582.07E-15
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h3.801.34E-13
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h4.373.79E-15
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.213.91E-02






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