gene detail

Gene description

TAIR ID: AT5G47500

Short description: Pectin lyase-like superfamily protein

Pathogen responsiveness: -2.09

General responsiveness: 0.46

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

cell wall modification, pectin catabolic process

GO cellular component

extracellular region, plant-type cell wall, cell wall

GO molecular function

pectinesterase activity, aspartyl esterase activity

Protein domain

Pfam	PF01095, Pectinesterase

Metabolic pathway

PWY-1081: homogalacturonan degradation

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.70	1.14E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.84	2.62E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.58	1.96E-07