Gene: AT5G47140
     


Gene description


TAIR ID: AT5G47140

Short description: GATA transcription factor 27

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


cell differentiation, regulation of transcription, DNA-templated


GO cellular component


nucleus, transcription factor complex


GO molecular function


RNA polymerase II regulatory region sequence-specific DNA binding, transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding, RNA polymerase II transcription factor binding, transcription factor activity, sequence-specific DNA binding, zinc ion binding, chromatin binding


Protein domain


PfamPF13919, Asx homology domain
PfamPF00320, GATA zinc finger
SMARTSM00401, ZnF_GATA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G62300, AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.398.01E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.806.15E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.876.88E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.981.58E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.721.19E-13






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