Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G47140

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006903: vesicle targeting0.00E+00
2GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
3GO:0010793: regulation of mRNA export from nucleus0.00E+00
4GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
5GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
6GO:0010401: pectic galactan metabolic process0.00E+00
7GO:0036503: ERAD pathway0.00E+00
8GO:0001881: receptor recycling0.00E+00
9GO:0006497: protein lipidation0.00E+00
10GO:0072722: response to amitrole0.00E+00
11GO:0010055: atrichoblast differentiation0.00E+00
12GO:0043132: NAD transport8.88E-06
13GO:0090630: activation of GTPase activity3.05E-05
14GO:0015031: protein transport3.22E-05
15GO:0010102: lateral root morphogenesis1.33E-04
16GO:0009225: nucleotide-sugar metabolic process1.88E-04
17GO:0060918: auxin transport2.53E-04
18GO:0046686: response to cadmium ion2.64E-04
19GO:0009814: defense response, incompatible interaction3.73E-04
20GO:0010227: floral organ abscission4.19E-04
21GO:0016337: single organismal cell-cell adhesion4.48E-04
22GO:0007292: female gamete generation4.48E-04
23GO:0009623: response to parasitic fungus4.48E-04
24GO:0035352: NAD transmembrane transport4.48E-04
25GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.48E-04
26GO:0006680: glucosylceramide catabolic process4.48E-04
27GO:0032491: detection of molecule of fungal origin4.48E-04
28GO:0031338: regulation of vesicle fusion4.48E-04
29GO:0042964: thioredoxin reduction4.48E-04
30GO:0032107: regulation of response to nutrient levels4.48E-04
31GO:0035266: meristem growth4.48E-04
32GO:0042147: retrograde transport, endosome to Golgi5.20E-04
33GO:0006623: protein targeting to vacuole7.59E-04
34GO:0048354: mucilage biosynthetic process involved in seed coat development9.39E-04
35GO:0008202: steroid metabolic process9.39E-04
36GO:0006886: intracellular protein transport9.56E-04
37GO:0006024: glycosaminoglycan biosynthetic process9.67E-04
38GO:0050684: regulation of mRNA processing9.67E-04
39GO:0052541: plant-type cell wall cellulose metabolic process9.67E-04
40GO:0019725: cellular homeostasis9.67E-04
41GO:0051252: regulation of RNA metabolic process9.67E-04
42GO:0015012: heparan sulfate proteoglycan biosynthetic process9.67E-04
43GO:0002240: response to molecule of oomycetes origin9.67E-04
44GO:0051788: response to misfolded protein9.67E-04
45GO:0042814: monopolar cell growth9.67E-04
46GO:0009156: ribonucleoside monophosphate biosynthetic process9.67E-04
47GO:1901703: protein localization involved in auxin polar transport9.67E-04
48GO:0046939: nucleotide phosphorylation9.67E-04
49GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.67E-04
50GO:0009615: response to virus1.31E-03
51GO:0009627: systemic acquired resistance1.51E-03
52GO:0010272: response to silver ion1.57E-03
53GO:0060968: regulation of gene silencing1.57E-03
54GO:0032784: regulation of DNA-templated transcription, elongation1.57E-03
55GO:0010253: UDP-rhamnose biosynthetic process1.57E-03
56GO:0051176: positive regulation of sulfur metabolic process1.57E-03
57GO:0008333: endosome to lysosome transport1.57E-03
58GO:0044375: regulation of peroxisome size1.57E-03
59GO:0055074: calcium ion homeostasis1.57E-03
60GO:0045836: positive regulation of meiotic nuclear division1.57E-03
61GO:0010186: positive regulation of cellular defense response1.57E-03
62GO:0006517: protein deglycosylation1.57E-03
63GO:0007165: signal transduction1.75E-03
64GO:0006612: protein targeting to membrane2.28E-03
65GO:0006893: Golgi to plasma membrane transport2.28E-03
66GO:0048577: negative regulation of short-day photoperiodism, flowering2.28E-03
67GO:0072334: UDP-galactose transmembrane transport2.28E-03
68GO:0015858: nucleoside transport2.28E-03
69GO:0032877: positive regulation of DNA endoreduplication2.28E-03
70GO:0000187: activation of MAPK activity2.28E-03
71GO:0048638: regulation of developmental growth3.06E-03
72GO:0006536: glutamate metabolic process3.06E-03
73GO:0033358: UDP-L-arabinose biosynthetic process3.06E-03
74GO:0006878: cellular copper ion homeostasis3.06E-03
75GO:0000919: cell plate assembly3.06E-03
76GO:0009165: nucleotide biosynthetic process3.06E-03
77GO:1990937: xylan acetylation3.06E-03
78GO:0060548: negative regulation of cell death3.06E-03
79GO:0045227: capsule polysaccharide biosynthetic process3.06E-03
80GO:0033320: UDP-D-xylose biosynthetic process3.06E-03
81GO:0016998: cell wall macromolecule catabolic process3.11E-03
82GO:0045454: cell redox homeostasis3.46E-03
83GO:0006665: sphingolipid metabolic process3.93E-03
84GO:0000304: response to singlet oxygen3.93E-03
85GO:0098719: sodium ion import across plasma membrane3.93E-03
86GO:0045927: positive regulation of growth3.93E-03
87GO:0097428: protein maturation by iron-sulfur cluster transfer3.93E-03
88GO:0031365: N-terminal protein amino acid modification3.93E-03
89GO:0009435: NAD biosynthetic process3.93E-03
90GO:0009846: pollen germination4.61E-03
91GO:0048232: male gamete generation4.86E-03
92GO:0006139: nucleobase-containing compound metabolic process4.86E-03
93GO:0043248: proteasome assembly4.86E-03
94GO:0042732: D-xylose metabolic process4.86E-03
95GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity4.86E-03
96GO:0003006: developmental process involved in reproduction4.86E-03
97GO:0009117: nucleotide metabolic process4.86E-03
98GO:0042176: regulation of protein catabolic process4.86E-03
99GO:0002238: response to molecule of fungal origin4.86E-03
100GO:0010315: auxin efflux4.86E-03
101GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly4.86E-03
102GO:0006121: mitochondrial electron transport, succinate to ubiquinone4.86E-03
103GO:0048827: phyllome development4.86E-03
104GO:0010264: myo-inositol hexakisphosphate biosynthetic process4.86E-03
105GO:0048544: recognition of pollen5.49E-03
106GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.87E-03
107GO:0000911: cytokinesis by cell plate formation5.87E-03
108GO:0010183: pollen tube guidance5.89E-03
109GO:0006891: intra-Golgi vesicle-mediated transport6.31E-03
110GO:0016310: phosphorylation6.89E-03
111GO:0007050: cell cycle arrest6.93E-03
112GO:1900056: negative regulation of leaf senescence6.93E-03
113GO:0015937: coenzyme A biosynthetic process6.93E-03
114GO:0080186: developmental vegetative growth6.93E-03
115GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.93E-03
116GO:0009610: response to symbiotic fungus6.93E-03
117GO:0080027: response to herbivore6.93E-03
118GO:0009567: double fertilization forming a zygote and endosperm7.66E-03
119GO:0006914: autophagy7.66E-03
120GO:0006511: ubiquitin-dependent protein catabolic process7.74E-03
121GO:0010078: maintenance of root meristem identity8.07E-03
122GO:0006491: N-glycan processing8.07E-03
123GO:0006102: isocitrate metabolic process8.07E-03
124GO:0006904: vesicle docking involved in exocytosis8.15E-03
125GO:0019430: removal of superoxide radicals9.27E-03
126GO:0022900: electron transport chain9.27E-03
127GO:0060321: acceptance of pollen9.27E-03
128GO:0010204: defense response signaling pathway, resistance gene-independent9.27E-03
129GO:0009657: plastid organization9.27E-03
130GO:0007338: single fertilization1.05E-02
131GO:0015780: nucleotide-sugar transport1.05E-02
132GO:0090332: stomatal closure1.18E-02
133GO:0048268: clathrin coat assembly1.18E-02
134GO:0051453: regulation of intracellular pH1.18E-02
135GO:0006499: N-terminal protein myristoylation1.32E-02
136GO:0051555: flavonol biosynthetic process1.32E-02
137GO:0006032: chitin catabolic process1.32E-02
138GO:0043069: negative regulation of programmed cell death1.32E-02
139GO:0048829: root cap development1.32E-02
140GO:0009555: pollen development1.36E-02
141GO:0006468: protein phosphorylation1.37E-02
142GO:0010015: root morphogenesis1.46E-02
143GO:0072593: reactive oxygen species metabolic process1.46E-02
144GO:0000272: polysaccharide catabolic process1.46E-02
145GO:0048229: gametophyte development1.46E-02
146GO:0040008: regulation of growth1.50E-02
147GO:0045087: innate immune response1.52E-02
148GO:0010150: leaf senescence1.59E-02
149GO:0006099: tricarboxylic acid cycle1.59E-02
150GO:0006790: sulfur compound metabolic process1.61E-02
151GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.61E-02
152GO:0042742: defense response to bacterium1.67E-02
153GO:0006839: mitochondrial transport1.74E-02
154GO:2000028: regulation of photoperiodism, flowering1.77E-02
155GO:0055046: microgametogenesis1.77E-02
156GO:0006887: exocytosis1.81E-02
157GO:0007166: cell surface receptor signaling pathway1.89E-02
158GO:0007034: vacuolar transport1.92E-02
159GO:0006541: glutamine metabolic process1.92E-02
160GO:0002237: response to molecule of bacterial origin1.92E-02
161GO:0009933: meristem structural organization1.92E-02
162GO:0009266: response to temperature stimulus1.92E-02
163GO:0051707: response to other organism1.97E-02
164GO:0007031: peroxisome organization2.09E-02
165GO:0042343: indole glucosinolate metabolic process2.09E-02
166GO:0010039: response to iron ion2.09E-02
167GO:0009825: multidimensional cell growth2.09E-02
168GO:0090351: seedling development2.09E-02
169GO:0070588: calcium ion transmembrane transport2.09E-02
170GO:0046854: phosphatidylinositol phosphorylation2.09E-02
171GO:0034976: response to endoplasmic reticulum stress2.26E-02
172GO:0000165: MAPK cascade2.38E-02
173GO:0009116: nucleoside metabolic process2.43E-02
174GO:0050832: defense response to fungus2.57E-02
175GO:0006874: cellular calcium ion homeostasis2.61E-02
176GO:0051321: meiotic cell cycle2.79E-02
177GO:0098542: defense response to other organism2.79E-02
178GO:0016226: iron-sulfur cluster assembly2.97E-02
179GO:0030433: ubiquitin-dependent ERAD pathway2.97E-02
180GO:0080092: regulation of pollen tube growth2.97E-02
181GO:0071456: cellular response to hypoxia2.97E-02
182GO:0071369: cellular response to ethylene stimulus3.16E-02
183GO:0006012: galactose metabolic process3.16E-02
184GO:0048316: seed development3.24E-02
185GO:0009651: response to salt stress3.35E-02
186GO:0042127: regulation of cell proliferation3.36E-02
187GO:0009620: response to fungus3.45E-02
188GO:0016117: carotenoid biosynthetic process3.56E-02
189GO:0010051: xylem and phloem pattern formation3.76E-02
190GO:0010087: phloem or xylem histogenesis3.76E-02
191GO:0010118: stomatal movement3.76E-02
192GO:0009624: response to nematode3.77E-02
193GO:0016192: vesicle-mediated transport3.84E-02
194GO:0006885: regulation of pH3.96E-02
195GO:0048868: pollen tube development3.96E-02
196GO:0006814: sodium ion transport4.17E-02
197GO:0055072: iron ion homeostasis4.38E-02
198GO:0032502: developmental process4.82E-02
RankGO TermAdjusted P value
1GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
2GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
3GO:0008734: L-aspartate oxidase activity0.00E+00
4GO:0051670: inulinase activity0.00E+00
5GO:0052873: FMN reductase (NADPH) activity0.00E+00
6GO:0044610: FMN transmembrane transporter activity0.00E+00
7GO:0008752: FMN reductase activity0.00E+00
8GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
9GO:0018580: nitronate monooxygenase activity0.00E+00
10GO:0019205: nucleobase-containing compound kinase activity0.00E+00
11GO:0051766: inositol trisphosphate kinase activity0.00E+00
12GO:1990585: hydroxyproline O-arabinosyltransferase activity8.88E-06
13GO:0051724: NAD transporter activity8.88E-06
14GO:0019779: Atg8 activating enzyme activity8.88E-06
15GO:0016301: kinase activity3.38E-04
16GO:2001227: quercitrin binding4.48E-04
17GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity4.48E-04
18GO:0047326: inositol tetrakisphosphate 5-kinase activity4.48E-04
19GO:0000824: inositol tetrakisphosphate 3-kinase activity4.48E-04
20GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity4.48E-04
21GO:0048037: cofactor binding4.48E-04
22GO:0004348: glucosylceramidase activity4.48E-04
23GO:0004633: phosphopantothenoylcysteine decarboxylase activity4.48E-04
24GO:0015230: FAD transmembrane transporter activity4.48E-04
25GO:0031219: levanase activity4.48E-04
26GO:0051669: fructan beta-fructosidase activity4.48E-04
27GO:2001147: camalexin binding4.48E-04
28GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity4.48E-04
29GO:0019786: Atg8-specific protease activity4.48E-04
30GO:0008142: oxysterol binding6.66E-04
31GO:0010280: UDP-L-rhamnose synthase activity9.67E-04
32GO:0008428: ribonuclease inhibitor activity9.67E-04
33GO:0004338: glucan exo-1,3-beta-glucosidase activity9.67E-04
34GO:0051980: iron-nicotianamine transmembrane transporter activity9.67E-04
35GO:0032934: sterol binding9.67E-04
36GO:0008805: carbon-monoxide oxygenase activity9.67E-04
37GO:0004385: guanylate kinase activity9.67E-04
38GO:0008517: folic acid transporter activity9.67E-04
39GO:0004775: succinate-CoA ligase (ADP-forming) activity9.67E-04
40GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity9.67E-04
41GO:0004776: succinate-CoA ligase (GDP-forming) activity9.67E-04
42GO:0050377: UDP-glucose 4,6-dehydratase activity9.67E-04
43GO:0015228: coenzyme A transmembrane transporter activity9.67E-04
44GO:0008460: dTDP-glucose 4,6-dehydratase activity9.67E-04
45GO:0008559: xenobiotic-transporting ATPase activity1.26E-03
46GO:0005524: ATP binding1.37E-03
47GO:0022857: transmembrane transporter activity1.43E-03
48GO:0042409: caffeoyl-CoA O-methyltransferase activity1.57E-03
49GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.57E-03
50GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.57E-03
51GO:0030247: polysaccharide binding1.61E-03
52GO:0005096: GTPase activator activity1.96E-03
53GO:0008061: chitin binding2.07E-03
54GO:0004867: serine-type endopeptidase inhibitor activity2.07E-03
55GO:0004749: ribose phosphate diphosphokinase activity2.28E-03
56GO:0035529: NADH pyrophosphatase activity2.28E-03
57GO:0019201: nucleotide kinase activity2.28E-03
58GO:0004449: isocitrate dehydrogenase (NAD+) activity2.28E-03
59GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity2.28E-03
60GO:0004351: glutamate decarboxylase activity2.28E-03
61GO:0019776: Atg8 ligase activity3.06E-03
62GO:0016004: phospholipase activator activity3.06E-03
63GO:0009916: alternative oxidase activity3.06E-03
64GO:0004301: epoxide hydrolase activity3.06E-03
65GO:0050373: UDP-arabinose 4-epimerase activity3.06E-03
66GO:0005459: UDP-galactose transmembrane transporter activity3.93E-03
67GO:0008948: oxaloacetate decarboxylase activity3.93E-03
68GO:0047631: ADP-ribose diphosphatase activity3.93E-03
69GO:0080122: AMP transmembrane transporter activity3.93E-03
70GO:0017137: Rab GTPase binding3.93E-03
71GO:0000104: succinate dehydrogenase activity3.93E-03
72GO:0047714: galactolipase activity4.86E-03
73GO:0000210: NAD+ diphosphatase activity4.86E-03
74GO:1990538: xylan O-acetyltransferase activity4.86E-03
75GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity4.86E-03
76GO:0036402: proteasome-activating ATPase activity4.86E-03
77GO:0048040: UDP-glucuronate decarboxylase activity4.86E-03
78GO:0016853: isomerase activity5.49E-03
79GO:0010181: FMN binding5.49E-03
80GO:0004791: thioredoxin-disulfide reductase activity5.49E-03
81GO:0070403: NAD+ binding5.87E-03
82GO:0004017: adenylate kinase activity5.87E-03
83GO:0005347: ATP transmembrane transporter activity5.87E-03
84GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.87E-03
85GO:0003950: NAD+ ADP-ribosyltransferase activity5.87E-03
86GO:0003978: UDP-glucose 4-epimerase activity5.87E-03
87GO:0051020: GTPase binding5.87E-03
88GO:0015217: ADP transmembrane transporter activity5.87E-03
89GO:0051920: peroxiredoxin activity5.87E-03
90GO:0005338: nucleotide-sugar transmembrane transporter activity6.93E-03
91GO:0008235: metalloexopeptidase activity6.93E-03
92GO:0008121: ubiquinol-cytochrome-c reductase activity6.93E-03
93GO:0008320: protein transmembrane transporter activity6.93E-03
94GO:0043295: glutathione binding6.93E-03
95GO:0015385: sodium:proton antiporter activity7.20E-03
96GO:0004525: ribonuclease III activity8.07E-03
97GO:0004708: MAP kinase kinase activity8.07E-03
98GO:0005544: calcium-dependent phospholipid binding8.07E-03
99GO:0004714: transmembrane receptor protein tyrosine kinase activity8.07E-03
100GO:0016209: antioxidant activity8.07E-03
101GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity8.15E-03
102GO:0008970: phosphatidylcholine 1-acylhydrolase activity9.27E-03
103GO:0004806: triglyceride lipase activity1.08E-02
104GO:0016798: hydrolase activity, acting on glycosyl bonds1.08E-02
105GO:0031490: chromatin DNA binding1.18E-02
106GO:0008047: enzyme activator activity1.32E-02
107GO:0030234: enzyme regulator activity1.32E-02
108GO:0004568: chitinase activity1.32E-02
109GO:0008171: O-methyltransferase activity1.32E-02
110GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity1.32E-02
111GO:0005545: 1-phosphatidylinositol binding1.32E-02
112GO:0030145: manganese ion binding1.39E-02
113GO:0015386: potassium:proton antiporter activity1.46E-02
114GO:0004177: aminopeptidase activity1.46E-02
115GO:0015297: antiporter activity1.50E-02
116GO:0015198: oligopeptide transporter activity1.61E-02
117GO:0005388: calcium-transporting ATPase activity1.77E-02
118GO:0004565: beta-galactosidase activity1.77E-02
119GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.77E-02
120GO:0015095: magnesium ion transmembrane transporter activity1.77E-02
121GO:0004175: endopeptidase activity1.92E-02
122GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.92E-02
123GO:0003824: catalytic activity2.00E-02
124GO:0017025: TBP-class protein binding2.09E-02
125GO:0004970: ionotropic glutamate receptor activity2.09E-02
126GO:0005217: intracellular ligand-gated ion channel activity2.09E-02
127GO:0004190: aspartic-type endopeptidase activity2.09E-02
128GO:0035091: phosphatidylinositol binding2.13E-02
129GO:0051287: NAD binding2.38E-02
130GO:0001046: core promoter sequence-specific DNA binding2.43E-02
131GO:0000287: magnesium ion binding2.70E-02
132GO:0005516: calmodulin binding2.72E-02
133GO:0004601: peroxidase activity2.76E-02
134GO:0004298: threonine-type endopeptidase activity2.79E-02
135GO:0035251: UDP-glucosyltransferase activity2.79E-02
136GO:0004540: ribonuclease activity2.79E-02
137GO:0016787: hydrolase activity2.97E-02
138GO:0046872: metal ion binding3.04E-02
139GO:0008810: cellulase activity3.16E-02
140GO:0003756: protein disulfide isomerase activity3.36E-02
141GO:0016887: ATPase activity3.37E-02
142GO:0047134: protein-disulfide reductase activity3.56E-02
143GO:0004674: protein serine/threonine kinase activity3.73E-02
144GO:0005451: monovalent cation:proton antiporter activity3.76E-02
145GO:0005509: calcium ion binding3.89E-02
146GO:0005199: structural constituent of cell wall3.96E-02
147GO:0030276: clathrin binding3.96E-02
148GO:0015299: solute:proton antiporter activity4.17E-02
149GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.84E-02
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Gene type



Gene DE type