Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G47140

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048034: heme O biosynthetic process0.00E+00
2GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation0.00E+00
3GO:2000117: negative regulation of cysteine-type endopeptidase activity0.00E+00
4GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
5GO:0010398: xylogalacturonan metabolic process0.00E+00
6GO:0016102: diterpenoid biosynthetic process0.00E+00
7GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
8GO:0072722: response to amitrole0.00E+00
9GO:0006216: cytidine catabolic process0.00E+00
10GO:0006102: isocitrate metabolic process3.37E-06
11GO:0006099: tricarboxylic acid cycle3.43E-06
12GO:0046686: response to cadmium ion1.94E-05
13GO:0000162: tryptophan biosynthetic process4.44E-05
14GO:0055114: oxidation-reduction process4.45E-05
15GO:0009407: toxin catabolic process4.57E-05
16GO:0006564: L-serine biosynthetic process5.28E-05
17GO:0009851: auxin biosynthetic process1.83E-04
18GO:0042964: thioredoxin reduction2.13E-04
19GO:0006680: glucosylceramide catabolic process2.13E-04
20GO:0060862: negative regulation of floral organ abscission2.13E-04
21GO:0010120: camalexin biosynthetic process2.25E-04
22GO:0031349: positive regulation of defense response4.76E-04
23GO:1902000: homogentisate catabolic process4.76E-04
24GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine4.76E-04
25GO:0051252: regulation of RNA metabolic process4.76E-04
26GO:0031204: posttranslational protein targeting to membrane, translocation4.76E-04
27GO:0046939: nucleotide phosphorylation4.76E-04
28GO:0006672: ceramide metabolic process4.76E-04
29GO:0042742: defense response to bacterium5.33E-04
30GO:0006979: response to oxidative stress5.43E-04
31GO:0006591: ornithine metabolic process7.74E-04
32GO:0002230: positive regulation of defense response to virus by host7.74E-04
33GO:0006556: S-adenosylmethionine biosynthetic process7.74E-04
34GO:0061158: 3'-UTR-mediated mRNA destabilization7.74E-04
35GO:0010272: response to silver ion7.74E-04
36GO:0009072: aromatic amino acid family metabolic process7.74E-04
37GO:0009617: response to bacterium9.03E-04
38GO:0016998: cell wall macromolecule catabolic process1.07E-03
39GO:1902290: positive regulation of defense response to oomycetes1.10E-03
40GO:0000187: activation of MAPK activity1.10E-03
41GO:0070301: cellular response to hydrogen peroxide1.10E-03
42GO:0010188: response to microbial phytotoxin1.47E-03
43GO:0045227: capsule polysaccharide biosynthetic process1.47E-03
44GO:0033358: UDP-L-arabinose biosynthetic process1.47E-03
45GO:0010600: regulation of auxin biosynthetic process1.47E-03
46GO:1901002: positive regulation of response to salt stress1.47E-03
47GO:0098719: sodium ion import across plasma membrane1.87E-03
48GO:0046283: anthocyanin-containing compound metabolic process1.87E-03
49GO:0000304: response to singlet oxygen1.87E-03
50GO:0060918: auxin transport2.31E-03
51GO:0009228: thiamine biosynthetic process2.31E-03
52GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione2.31E-03
53GO:0009972: cytidine deamination2.31E-03
54GO:0006561: proline biosynthetic process2.31E-03
55GO:0010942: positive regulation of cell death2.31E-03
56GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.31E-03
57GO:0006555: methionine metabolic process2.31E-03
58GO:0045454: cell redox homeostasis2.43E-03
59GO:0009082: branched-chain amino acid biosynthetic process2.77E-03
60GO:0009099: valine biosynthetic process2.77E-03
61GO:0019509: L-methionine salvage from methylthioadenosine2.77E-03
62GO:0051607: defense response to virus2.90E-03
63GO:0071669: plant-type cell wall organization or biogenesis3.26E-03
64GO:1900057: positive regulation of leaf senescence3.26E-03
65GO:0050829: defense response to Gram-negative bacterium3.26E-03
66GO:0080027: response to herbivore3.26E-03
67GO:1900056: negative regulation of leaf senescence3.26E-03
68GO:0006629: lipid metabolic process3.34E-03
69GO:0009819: drought recovery3.78E-03
70GO:0010150: leaf senescence3.95E-03
71GO:0009657: plastid organization4.33E-03
72GO:0009097: isoleucine biosynthetic process4.33E-03
73GO:0022900: electron transport chain4.33E-03
74GO:0019430: removal of superoxide radicals4.33E-03
75GO:0010043: response to zinc ion4.62E-03
76GO:0006783: heme biosynthetic process4.90E-03
77GO:0010112: regulation of systemic acquired resistance4.90E-03
78GO:0051453: regulation of intracellular pH5.50E-03
79GO:1900426: positive regulation of defense response to bacterium5.50E-03
80GO:0043067: regulation of programmed cell death5.50E-03
81GO:0009098: leucine biosynthetic process5.50E-03
82GO:0050832: defense response to fungus5.75E-03
83GO:0006032: chitin catabolic process6.12E-03
84GO:0009688: abscisic acid biosynthetic process6.12E-03
85GO:0043069: negative regulation of programmed cell death6.12E-03
86GO:0009682: induced systemic resistance6.77E-03
87GO:0052544: defense response by callose deposition in cell wall6.77E-03
88GO:0006415: translational termination6.77E-03
89GO:0000272: polysaccharide catabolic process6.77E-03
90GO:0000209: protein polyubiquitination6.79E-03
91GO:0009636: response to toxic substance7.34E-03
92GO:0071365: cellular response to auxin stimulus7.44E-03
93GO:0006790: sulfur compound metabolic process7.44E-03
94GO:0009651: response to salt stress7.47E-03
95GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process7.91E-03
96GO:0031347: regulation of defense response7.91E-03
97GO:0010102: lateral root morphogenesis8.13E-03
98GO:0006807: nitrogen compound metabolic process8.13E-03
99GO:0055046: microgametogenesis8.13E-03
100GO:0009718: anthocyanin-containing compound biosynthetic process8.13E-03
101GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process8.13E-03
102GO:0009266: response to temperature stimulus8.84E-03
103GO:0046854: phosphatidylinositol phosphorylation9.58E-03
104GO:0009225: nucleotide-sugar metabolic process9.58E-03
105GO:0007030: Golgi organization9.58E-03
106GO:0034976: response to endoplasmic reticulum stress1.03E-02
107GO:0045333: cellular respiration1.11E-02
108GO:0005992: trehalose biosynthetic process1.11E-02
109GO:0010073: meristem maintenance1.19E-02
110GO:0006874: cellular calcium ion homeostasis1.19E-02
111GO:0006730: one-carbon metabolic process1.36E-02
112GO:0030433: ubiquitin-dependent ERAD pathway1.36E-02
113GO:0071456: cellular response to hypoxia1.36E-02
114GO:0030245: cellulose catabolic process1.36E-02
115GO:0009814: defense response, incompatible interaction1.36E-02
116GO:0009693: ethylene biosynthetic process1.45E-02
117GO:0010227: floral organ abscission1.45E-02
118GO:0006012: galactose metabolic process1.45E-02
119GO:0009751: response to salicylic acid1.46E-02
120GO:0009561: megagametogenesis1.53E-02
121GO:0009306: protein secretion1.53E-02
122GO:0016117: carotenoid biosynthetic process1.62E-02
123GO:0008152: metabolic process1.68E-02
124GO:0010051: xylem and phloem pattern formation1.72E-02
125GO:0042631: cellular response to water deprivation1.72E-02
126GO:0042744: hydrogen peroxide catabolic process1.80E-02
127GO:0006662: glycerol ether metabolic process1.81E-02
128GO:0045489: pectin biosynthetic process1.81E-02
129GO:0006468: protein phosphorylation1.83E-02
130GO:0048544: recognition of pollen1.91E-02
131GO:0006814: sodium ion transport1.91E-02
132GO:0010183: pollen tube guidance2.00E-02
133GO:0000302: response to reactive oxygen species2.10E-02
134GO:0010193: response to ozone2.10E-02
135GO:0045490: pectin catabolic process2.18E-02
136GO:0009630: gravitropism2.20E-02
137GO:0071281: cellular response to iron ion2.31E-02
138GO:1901657: glycosyl compound metabolic process2.31E-02
139GO:0006464: cellular protein modification process2.41E-02
140GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.44E-02
141GO:0071805: potassium ion transmembrane transport2.52E-02
142GO:0009615: response to virus2.73E-02
143GO:0006974: cellular response to DNA damage stimulus2.95E-02
144GO:0009627: systemic acquired resistance2.95E-02
145GO:0009611: response to wounding3.14E-02
146GO:0016049: cell growth3.18E-02
147GO:0008219: cell death3.30E-02
148GO:0009817: defense response to fungus, incompatible interaction3.30E-02
149GO:0010311: lateral root formation3.42E-02
150GO:0006499: N-terminal protein myristoylation3.54E-02
151GO:0009631: cold acclimation3.66E-02
152GO:0007568: aging3.66E-02
153GO:0045087: innate immune response3.91E-02
154GO:0034599: cellular response to oxidative stress4.03E-02
155GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.31E-02
156GO:0016192: vesicle-mediated transport4.38E-02
157GO:0042542: response to hydrogen peroxide4.55E-02
158GO:0051707: response to other organism4.68E-02
159GO:0009644: response to high light intensity4.94E-02
RankGO TermAdjusted P value
1GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
2GO:0080013: (E,E)-geranyllinalool synthase activity0.00E+00
3GO:0047844: deoxycytidine deaminase activity0.00E+00
4GO:0008495: protoheme IX farnesyltransferase activity0.00E+00
5GO:0001729: ceramide kinase activity0.00E+00
6GO:0016504: peptidase activator activity0.00E+00
7GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
8GO:0016034: maleylacetoacetate isomerase activity0.00E+00
9GO:0051766: inositol trisphosphate kinase activity0.00E+00
10GO:0051670: inulinase activity0.00E+00
11GO:0070577: lysine-acetylated histone binding0.00E+00
12GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
13GO:0004449: isocitrate dehydrogenase (NAD+) activity5.93E-08
14GO:0004364: glutathione transferase activity8.88E-05
15GO:0043295: glutathione binding1.42E-04
16GO:0004714: transmembrane receptor protein tyrosine kinase activity1.82E-04
17GO:0047326: inositol tetrakisphosphate 5-kinase activity2.13E-04
18GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity2.13E-04
19GO:0048037: cofactor binding2.13E-04
20GO:0004348: glucosylceramidase activity2.13E-04
21GO:0031219: levanase activity2.13E-04
22GO:2001147: camalexin binding2.13E-04
23GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.13E-04
24GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity2.13E-04
25GO:0004649: poly(ADP-ribose) glycohydrolase activity2.13E-04
26GO:0016229: steroid dehydrogenase activity2.13E-04
27GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity2.13E-04
28GO:0010179: IAA-Ala conjugate hydrolase activity2.13E-04
29GO:2001227: quercitrin binding2.13E-04
30GO:0004425: indole-3-glycerol-phosphate synthase activity2.13E-04
31GO:0000824: inositol tetrakisphosphate 3-kinase activity2.13E-04
32GO:0033984: indole-3-glycerol-phosphate lyase activity2.13E-04
33GO:0070401: NADP+ binding2.13E-04
34GO:0051669: fructan beta-fructosidase activity2.13E-04
35GO:0004601: peroxidase activity2.41E-04
36GO:0008428: ribonuclease inhibitor activity4.76E-04
37GO:1990585: hydroxyproline O-arabinosyltransferase activity4.76E-04
38GO:0004775: succinate-CoA ligase (ADP-forming) activity4.76E-04
39GO:0019172: glyoxalase III activity4.76E-04
40GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity4.76E-04
41GO:0004776: succinate-CoA ligase (GDP-forming) activity4.76E-04
42GO:0052739: phosphatidylserine 1-acylhydrolase activity4.76E-04
43GO:0010297: heteropolysaccharide binding4.76E-04
44GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity4.76E-04
45GO:0004617: phosphoglycerate dehydrogenase activity4.76E-04
46GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity7.74E-04
47GO:0003955: NAD(P)H dehydrogenase (quinone) activity7.74E-04
48GO:0004049: anthranilate synthase activity7.74E-04
49GO:0004478: methionine adenosyltransferase activity7.74E-04
50GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity7.74E-04
51GO:0004416: hydroxyacylglutathione hydrolase activity1.10E-03
52GO:0016149: translation release factor activity, codon specific1.10E-03
53GO:0010178: IAA-amino acid conjugate hydrolase activity1.10E-03
54GO:0016656: monodehydroascorbate reductase (NADH) activity1.10E-03
55GO:0052656: L-isoleucine transaminase activity1.10E-03
56GO:0052654: L-leucine transaminase activity1.10E-03
57GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.10E-03
58GO:0052655: L-valine transaminase activity1.10E-03
59GO:0019201: nucleotide kinase activity1.10E-03
60GO:0004084: branched-chain-amino-acid transaminase activity1.47E-03
61GO:0070628: proteasome binding1.47E-03
62GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.47E-03
63GO:0004031: aldehyde oxidase activity1.47E-03
64GO:0050302: indole-3-acetaldehyde oxidase activity1.47E-03
65GO:0009916: alternative oxidase activity1.47E-03
66GO:0004659: prenyltransferase activity1.47E-03
67GO:0050373: UDP-arabinose 4-epimerase activity1.47E-03
68GO:0004834: tryptophan synthase activity1.47E-03
69GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.47E-03
70GO:0005086: ARF guanyl-nucleotide exchange factor activity1.47E-03
71GO:0004791: thioredoxin-disulfide reductase activity1.86E-03
72GO:0008948: oxaloacetate decarboxylase activity1.87E-03
73GO:0008374: O-acyltransferase activity1.87E-03
74GO:0015035: protein disulfide oxidoreductase activity2.05E-03
75GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity2.31E-03
76GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity2.31E-03
77GO:0035252: UDP-xylosyltransferase activity2.31E-03
78GO:0008237: metallopeptidase activity2.74E-03
79GO:0004017: adenylate kinase activity2.77E-03
80GO:0004602: glutathione peroxidase activity2.77E-03
81GO:0003978: UDP-glucose 4-epimerase activity2.77E-03
82GO:0004126: cytidine deaminase activity2.77E-03
83GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.77E-03
84GO:0008320: protein transmembrane transporter activity3.26E-03
85GO:0008121: ubiquinol-cytochrome-c reductase activity3.26E-03
86GO:0004806: triglyceride lipase activity3.61E-03
87GO:0004033: aldo-keto reductase (NADP) activity3.78E-03
88GO:0004311: farnesyltranstransferase activity3.78E-03
89GO:0004708: MAP kinase kinase activity3.78E-03
90GO:0003951: NAD+ kinase activity4.33E-03
91GO:0008970: phosphatidylcholine 1-acylhydrolase activity4.33E-03
92GO:0003747: translation release factor activity4.90E-03
93GO:0004713: protein tyrosine kinase activity6.12E-03
94GO:0004568: chitinase activity6.12E-03
95GO:0015386: potassium:proton antiporter activity6.77E-03
96GO:0008794: arsenate reductase (glutaredoxin) activity6.77E-03
97GO:0051287: NAD binding7.91E-03
98GO:0031624: ubiquitin conjugating enzyme binding8.84E-03
99GO:0008061: chitin binding9.58E-03
100GO:0005217: intracellular ligand-gated ion channel activity9.58E-03
101GO:0004970: ionotropic glutamate receptor activity9.58E-03
102GO:0046872: metal ion binding1.25E-02
103GO:0010333: terpene synthase activity1.27E-02
104GO:0008810: cellulase activity1.45E-02
105GO:0003727: single-stranded RNA binding1.53E-02
106GO:0003756: protein disulfide isomerase activity1.53E-02
107GO:0047134: protein-disulfide reductase activity1.62E-02
108GO:0004674: protein serine/threonine kinase activity1.68E-02
109GO:0005524: ATP binding1.70E-02
110GO:0005199: structural constituent of cell wall1.81E-02
111GO:0008080: N-acetyltransferase activity1.81E-02
112GO:0010181: FMN binding1.91E-02
113GO:0015385: sodium:proton antiporter activity2.31E-02
114GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.31E-02
115GO:0016301: kinase activity2.35E-02
116GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.52E-02
117GO:0016722: oxidoreductase activity, oxidizing metal ions2.52E-02
118GO:0016597: amino acid binding2.62E-02
119GO:0003824: catalytic activity2.65E-02
120GO:0102483: scopolin beta-glucosidase activity3.07E-02
121GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.30E-02
122GO:0000287: magnesium ion binding3.31E-02
123GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.66E-02
124GO:0043531: ADP binding3.69E-02
125GO:0050660: flavin adenine dinucleotide binding3.89E-02
126GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.91E-02
127GO:0008422: beta-glucosidase activity4.16E-02
128GO:0004712: protein serine/threonine/tyrosine kinase activity4.16E-02
129GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.30E-02
130GO:0061630: ubiquitin protein ligase activity4.38E-02
131GO:0052689: carboxylic ester hydrolase activity4.60E-02
132GO:0005507: copper ion binding4.71E-02
133GO:0051537: 2 iron, 2 sulfur cluster binding4.94E-02
RankGO TermAdjusted P value
1GO:0031205: endoplasmic reticulum Sec complex0.00E+00
2GO:0005784: Sec61 translocon complex0.00E+00
3GO:0046862: chromoplast membrane0.00E+00
4GO:0005886: plasma membrane6.90E-05
5GO:0045252: oxoglutarate dehydrogenase complex2.13E-04
6GO:0032580: Golgi cisterna membrane2.63E-04
7GO:0005783: endoplasmic reticulum3.14E-04
8GO:0005788: endoplasmic reticulum lumen3.58E-04
9GO:0005950: anthranilate synthase complex4.76E-04
10GO:0009530: primary cell wall7.74E-04
11GO:0005829: cytosol1.14E-03
12GO:0005794: Golgi apparatus2.67E-03
13GO:0030173: integral component of Golgi membrane2.77E-03
14GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane3.26E-03
15GO:0031901: early endosome membrane4.90E-03
16GO:0031090: organelle membrane4.90E-03
17GO:0005750: mitochondrial respiratory chain complex III8.84E-03
18GO:0070469: respiratory chain1.19E-02
19GO:0009570: chloroplast stroma1.26E-02
20GO:0005839: proteasome core complex1.27E-02
21GO:0005768: endosome1.97E-02
22GO:0016592: mediator complex2.20E-02
23GO:0071944: cell periphery2.31E-02
24GO:0005737: cytoplasm2.90E-02
25GO:0009505: plant-type cell wall3.21E-02
26GO:0000151: ubiquitin ligase complex3.30E-02
27GO:0090406: pollen tube4.68E-02
28GO:0005773: vacuole4.76E-02
29GO:0016021: integral component of membrane4.89E-02
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Gene type



Gene DE type