gene detail

Gene description

TAIR ID: AT5G46240

Short description: potassium channel in Arabidopsis thaliana 1

Pathogen responsiveness: -1.04

General responsiveness: 1.28

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

potassium ion transmembrane transport, potassium ion transport, regulation of ion transmembrane transport, regulation of membrane potential

GO cellular component

plasma membrane, integral component of plasma membrane, nucleus

GO molecular function

identical protein binding, protein binding, inward rectifier potassium channel activity

Protein domain

Pfam	PF00520, Ion transport protein
Pfam	PF11834, KHA, dimerisation domain of potassium ion channel
Pfam	PF00027, Cyclic nucleotide-binding domain
SMART	SM00100, cNMP

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT2G43010, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 14 (Top20%)

Coexpression network

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.86	2.77E-08
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.67	3.12E-03
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.18	3.54E-08
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.64	8.68E-04
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.62	5.44E-08
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.83	4.66E-09
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.88	1.51E-09