Gene: AT5G42900
Gene description
TAIR ID: AT5G42900
Short description: cold regulated gene 27
Pathogen responsiveness: 1.66
General responsiveness: 1.28
GO biological process
response to cold, vegetative to reproductive phase transition of meristem, response to karrikin, regulation of circadian rhythm
GO cellular component
nucleus
GO molecular function
molecular_function
Protein domain
No domain annotation
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
click to view PPI networkCoexpression network
Differentially expressed condition 
29 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE12856 | Col, WT, control | Col, WT, Bg h | -1.78 | 1.10E-07 |
| GSE17464 | Laer, control | Laer, PstDC3000 12 h | 3.52 | 5.46E-05 |
| GSE17464 | Penta, control | Penta, PstDC3000 12 h | 3.13 | 2.41E-04 |
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | 3.81 | 1.32E-06 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | 3.79 | 4.08E-07 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | 4.02 | 7.15E-07 |
| GSE26679 | Col, WT, GC 0 h | Col, WT, GC 18 h | 5.94 | 2.30E-14 |
| GSE26679 | Col, WT, GC 0 h | Col, WT, GC 36 h | 7.22 | 2.44E-16 |
| GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 18 h | 6.38 | 5.31E-15 |
| GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 36 h | 7.90 | 2.67E-17 |
| GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 96 h | 1.72 | 8.31E-05 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | 3.95 | 1.74E-17 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | 4.40 | 8.45E-18 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 3.11 | 2.18E-16 |
| GSE45214 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | 1.73 | 1.36E-05 |
| GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | -3.33 | 3.58E-04 |
| GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | -4.77 | 6.84E-06 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | 3.93 | 1.36E-03 |
| GSE5520 | Col, WT, control 24 h | Col, WT, PstDC3000 24 h | 2.71 | 4.66E-02 |
| GSE5520 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | 1.97 | 4.61E-02 |
| GSE56094 | Col, WT, control 10 h | Col, WT, PstDC3000 10 h | 3.52 | 6.31E-19 |
| GSE56094 | Col, WT, control 11 h | Col, WT, PstDC3000 11 h | 3.00 | 7.97E-15 |
| GSE56094 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 2.49 | 1.84E-11 |
| GSE56094 | Col, WT, control 13 h | Col, WT, PstDC3000 13 h | 2.86 | 3.46E-14 |
| GSE56094 | Col, WT, control 6 h | Col, WT, PstDC3000 6 h | 1.50 | 6.11E-05 |
| GSE56094 | Col, WT, control 7 h | Col, WT, PstDC3000 7 h | 2.02 | 9.15E-08 |
| GSE56094 | Col, WT, control 8 h | Col, WT, PstDC3000 8 h | 3.16 | 8.58E-16 |
| GSE56094 | Col, WT, control 9 h | Col, WT, PstDC3000 9 h | 2.54 | 2.08E-11 |
| GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 12 h | 2.63 | 9.44E-04 |
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