Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G42900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0005993: trehalose catabolic process0.00E+00
2GO:0042753: positive regulation of circadian rhythm7.42E-06
3GO:0031539: positive regulation of anthocyanin metabolic process8.12E-06
4GO:0007623: circadian rhythm1.08E-05
5GO:0010017: red or far-red light signaling pathway1.22E-05
6GO:0006611: protein export from nucleus2.19E-05
7GO:0000055: ribosomal large subunit export from nucleus3.99E-05
8GO:0009649: entrainment of circadian clock8.58E-05
9GO:0007029: endoplasmic reticulum organization1.12E-04
10GO:0009585: red, far-red light phototransduction1.35E-04
11GO:0009909: regulation of flower development1.51E-04
12GO:0009648: photoperiodism1.71E-04
13GO:0009704: de-etiolation2.37E-04
14GO:0010208: pollen wall assembly2.71E-04
15GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay3.07E-04
16GO:0010468: regulation of gene expression4.10E-04
17GO:0010105: negative regulation of ethylene-activated signaling pathway4.58E-04
18GO:0030150: protein import into mitochondrial matrix6.66E-04
19GO:0048511: rhythmic process7.53E-04
20GO:0051260: protein homooligomerization7.53E-04
21GO:0031348: negative regulation of defense response7.99E-04
22GO:0009294: DNA mediated transformation8.44E-04
23GO:0006351: transcription, DNA-templated9.07E-04
24GO:0009639: response to red or far red light1.34E-03
25GO:0010286: heat acclimation1.39E-03
26GO:0048573: photoperiodism, flowering1.67E-03
27GO:0009834: plant-type secondary cell wall biogenesis1.91E-03
28GO:0006355: regulation of transcription, DNA-templated2.04E-03
29GO:0042542: response to hydrogen peroxide2.42E-03
30GO:0010114: response to red light2.49E-03
31GO:0008643: carbohydrate transport2.62E-03
32GO:0000165: MAPK cascade2.83E-03
33GO:0009740: gibberellic acid mediated signaling pathway3.71E-03
34GO:0009624: response to nematode3.86E-03
35GO:0006470: protein dephosphorylation6.15E-03
36GO:0007165: signal transduction6.69E-03
37GO:0009737: response to abscisic acid6.85E-03
38GO:0009723: response to ethylene8.41E-03
39GO:0080167: response to karrikin8.82E-03
40GO:0009873: ethylene-activated signaling pathway1.39E-02
41GO:0009908: flower development1.62E-02
42GO:0009738: abscisic acid-activated signaling pathway1.70E-02
43GO:0035556: intracellular signal transduction1.81E-02
44GO:0045893: positive regulation of transcription, DNA-templated1.92E-02
45GO:0006457: protein folding2.09E-02
46GO:0006511: ubiquitin-dependent protein catabolic process2.17E-02
47GO:0030154: cell differentiation3.06E-02
RankGO TermAdjusted P value
1GO:0004555: alpha,alpha-trehalase activity0.00E+00
2GO:0015927: trehalase activity8.12E-06
3GO:0043023: ribosomal large subunit binding6.14E-05
4GO:0051119: sugar transmembrane transporter activity5.80E-04
5GO:0004707: MAP kinase activity7.53E-04
6GO:0003677: DNA binding1.17E-03
7GO:0004721: phosphoprotein phosphatase activity1.67E-03
8GO:0005515: protein binding3.55E-03
9GO:0003700: transcription factor activity, sequence-specific DNA binding3.65E-03
10GO:0042626: ATPase activity, coupled to transmembrane movement of substances6.62E-03
11GO:0042802: identical protein binding6.62E-03
12GO:0042803: protein homodimerization activity1.03E-02
13GO:0004722: protein serine/threonine phosphatase activity1.07E-02
14GO:0044212: transcription regulatory region DNA binding2.88E-02
15GO:0046983: protein dimerization activity3.54E-02
16GO:0003729: mRNA binding3.83E-02
RankGO TermAdjusted P value
1GO:0030688: preribosome, small subunit precursor8.12E-06
2GO:0005744: mitochondrial inner membrane presequence translocase complex8.91E-04
3GO:0019005: SCF ubiquitin ligase complex1.79E-03
4GO:0005634: nucleus2.33E-03
5GO:0005743: mitochondrial inner membrane1.10E-02
6GO:0005887: integral component of plasma membrane1.44E-02
7GO:0005622: intracellular2.62E-02
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Gene type



Gene DE type