Gene: AT5G42270
     


Gene description


TAIR ID: AT5G42270

Short description: FtsH extracellular protease family

Pathogen responsiveness: -0.99

General responsiveness: 1.60

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G126361  

Wheat: No orthologous gene

GO biological process


photosystem II repair, photosystem I assembly, photoinhibition, response to cytokinin, protein catabolic process, proteolysis, PSII associated light-harvesting complex II catabolic process, multicellular organism development


GO cellular component


chloroplast envelope, chloroplast thylakoid membrane, chloroplast, chloroplast thylakoid, integral component of membrane, thylakoid


GO molecular function


metal ion binding, ATPase activity, metallopeptidase activity, ATP binding, ATP-dependent peptidase activity, metalloendopeptidase activity


Protein domain


PfamPF01434, Peptidase family M41
PfamPF00004, ATPase family associated with various cellular activities (AAA)
SMARTSM00382, AAA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


8 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.519.27E-08
GSE17464Laer, controlLaer, PstDC3000 12 h-1.621.83E-08
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-1.901.19E-10
GSE17464Penta, controlPenta, PstDC3000 12 h-2.031.35E-11
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.152.67E-04
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.673.82E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.822.58E-06
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.932.84E-08






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