GO Enrichment Analysis of Co-expressed Genes with
AT5G42270
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 2 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.57E-08 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 1.29E-07 |
| 7 | GO:0010027: thylakoid membrane organization | 3.76E-07 |
| 8 | GO:0000373: Group II intron splicing | 4.28E-06 |
| 9 | GO:0010021: amylopectin biosynthetic process | 2.35E-05 |
| 10 | GO:0055114: oxidation-reduction process | 2.39E-05 |
| 11 | GO:0010196: nonphotochemical quenching | 1.05E-04 |
| 12 | GO:0019252: starch biosynthetic process | 1.24E-04 |
| 13 | GO:0009658: chloroplast organization | 1.38E-04 |
| 14 | GO:0071482: cellular response to light stimulus | 1.69E-04 |
| 15 | GO:0051775: response to redox state | 1.75E-04 |
| 16 | GO:0080051: cutin transport | 1.75E-04 |
| 17 | GO:0065002: intracellular protein transmembrane transport | 1.75E-04 |
| 18 | GO:0080093: regulation of photorespiration | 1.75E-04 |
| 19 | GO:0031998: regulation of fatty acid beta-oxidation | 1.75E-04 |
| 20 | GO:0000023: maltose metabolic process | 1.75E-04 |
| 21 | GO:0043953: protein transport by the Tat complex | 1.75E-04 |
| 22 | GO:0015979: photosynthesis | 2.75E-04 |
| 23 | GO:0005983: starch catabolic process | 3.86E-04 |
| 24 | GO:0009629: response to gravity | 3.96E-04 |
| 25 | GO:0007154: cell communication | 3.96E-04 |
| 26 | GO:0097054: L-glutamate biosynthetic process | 3.96E-04 |
| 27 | GO:1904143: positive regulation of carotenoid biosynthetic process | 3.96E-04 |
| 28 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.96E-04 |
| 29 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.96E-04 |
| 30 | GO:0015908: fatty acid transport | 3.96E-04 |
| 31 | GO:0006108: malate metabolic process | 4.39E-04 |
| 32 | GO:0005986: sucrose biosynthetic process | 4.39E-04 |
| 33 | GO:0009853: photorespiration | 4.48E-04 |
| 34 | GO:0019253: reductive pentose-phosphate cycle | 4.96E-04 |
| 35 | GO:0051604: protein maturation | 6.47E-04 |
| 36 | GO:0016050: vesicle organization | 6.47E-04 |
| 37 | GO:0006000: fructose metabolic process | 6.47E-04 |
| 38 | GO:0015675: nickel cation transport | 6.47E-04 |
| 39 | GO:0016556: mRNA modification | 9.23E-04 |
| 40 | GO:0006537: glutamate biosynthetic process | 9.23E-04 |
| 41 | GO:0006020: inositol metabolic process | 9.23E-04 |
| 42 | GO:0051513: regulation of monopolar cell growth | 9.23E-04 |
| 43 | GO:0009152: purine ribonucleotide biosynthetic process | 9.23E-04 |
| 44 | GO:0046653: tetrahydrofolate metabolic process | 9.23E-04 |
| 45 | GO:0006107: oxaloacetate metabolic process | 9.23E-04 |
| 46 | GO:0009735: response to cytokinin | 1.04E-03 |
| 47 | GO:0006021: inositol biosynthetic process | 1.22E-03 |
| 48 | GO:0071483: cellular response to blue light | 1.22E-03 |
| 49 | GO:0006734: NADH metabolic process | 1.22E-03 |
| 50 | GO:0010222: stem vascular tissue pattern formation | 1.22E-03 |
| 51 | GO:0019676: ammonia assimilation cycle | 1.22E-03 |
| 52 | GO:0015994: chlorophyll metabolic process | 1.22E-03 |
| 53 | GO:0080110: sporopollenin biosynthetic process | 1.56E-03 |
| 54 | GO:0043097: pyrimidine nucleoside salvage | 1.56E-03 |
| 55 | GO:0006097: glyoxylate cycle | 1.56E-03 |
| 56 | GO:0009247: glycolipid biosynthetic process | 1.56E-03 |
| 57 | GO:0046855: inositol phosphate dephosphorylation | 1.91E-03 |
| 58 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.91E-03 |
| 59 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.91E-03 |
| 60 | GO:0006206: pyrimidine nucleobase metabolic process | 1.91E-03 |
| 61 | GO:1901259: chloroplast rRNA processing | 2.30E-03 |
| 62 | GO:0006458: 'de novo' protein folding | 2.30E-03 |
| 63 | GO:0009854: oxidative photosynthetic carbon pathway | 2.30E-03 |
| 64 | GO:0042026: protein refolding | 2.30E-03 |
| 65 | GO:0006810: transport | 2.38E-03 |
| 66 | GO:0009645: response to low light intensity stimulus | 2.70E-03 |
| 67 | GO:0030091: protein repair | 3.13E-03 |
| 68 | GO:0019375: galactolipid biosynthetic process | 3.13E-03 |
| 69 | GO:0009704: de-etiolation | 3.13E-03 |
| 70 | GO:0005978: glycogen biosynthetic process | 3.13E-03 |
| 71 | GO:0006002: fructose 6-phosphate metabolic process | 3.58E-03 |
| 72 | GO:0006099: tricarboxylic acid cycle | 4.02E-03 |
| 73 | GO:0010206: photosystem II repair | 4.05E-03 |
| 74 | GO:0034765: regulation of ion transmembrane transport | 4.05E-03 |
| 75 | GO:0005982: starch metabolic process | 4.54E-03 |
| 76 | GO:0010205: photoinhibition | 4.54E-03 |
| 77 | GO:0006352: DNA-templated transcription, initiation | 5.58E-03 |
| 78 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.58E-03 |
| 79 | GO:0006790: sulfur compound metabolic process | 6.13E-03 |
| 80 | GO:0080167: response to karrikin | 6.34E-03 |
| 81 | GO:0006094: gluconeogenesis | 6.70E-03 |
| 82 | GO:0009767: photosynthetic electron transport chain | 6.70E-03 |
| 83 | GO:0010588: cotyledon vascular tissue pattern formation | 6.70E-03 |
| 84 | GO:0009409: response to cold | 7.11E-03 |
| 85 | GO:0010207: photosystem II assembly | 7.28E-03 |
| 86 | GO:0010020: chloroplast fission | 7.28E-03 |
| 87 | GO:0090351: seedling development | 7.89E-03 |
| 88 | GO:0046854: phosphatidylinositol phosphorylation | 7.89E-03 |
| 89 | GO:0005985: sucrose metabolic process | 7.89E-03 |
| 90 | GO:0019762: glucosinolate catabolic process | 8.51E-03 |
| 91 | GO:0007017: microtubule-based process | 9.80E-03 |
| 92 | GO:0009768: photosynthesis, light harvesting in photosystem I | 9.80E-03 |
| 93 | GO:0016575: histone deacetylation | 9.80E-03 |
| 94 | GO:0032259: methylation | 9.86E-03 |
| 95 | GO:0006508: proteolysis | 1.01E-02 |
| 96 | GO:0061077: chaperone-mediated protein folding | 1.05E-02 |
| 97 | GO:0009269: response to desiccation | 1.05E-02 |
| 98 | GO:0016226: iron-sulfur cluster assembly | 1.12E-02 |
| 99 | GO:0009058: biosynthetic process | 1.26E-02 |
| 100 | GO:0010584: pollen exine formation | 1.26E-02 |
| 101 | GO:0070417: cellular response to cold | 1.33E-02 |
| 102 | GO:0042391: regulation of membrane potential | 1.41E-02 |
| 103 | GO:0042631: cellular response to water deprivation | 1.41E-02 |
| 104 | GO:0009741: response to brassinosteroid | 1.49E-02 |
| 105 | GO:0042742: defense response to bacterium | 1.52E-02 |
| 106 | GO:0048544: recognition of pollen | 1.56E-02 |
| 107 | GO:0006814: sodium ion transport | 1.56E-02 |
| 108 | GO:0009646: response to absence of light | 1.56E-02 |
| 109 | GO:0009791: post-embryonic development | 1.64E-02 |
| 110 | GO:0019761: glucosinolate biosynthetic process | 1.81E-02 |
| 111 | GO:0032502: developmental process | 1.81E-02 |
| 112 | GO:0009567: double fertilization forming a zygote and endosperm | 1.98E-02 |
| 113 | GO:0071805: potassium ion transmembrane transport | 2.06E-02 |
| 114 | GO:0009416: response to light stimulus | 2.15E-02 |
| 115 | GO:0015995: chlorophyll biosynthetic process | 2.52E-02 |
| 116 | GO:0018298: protein-chromophore linkage | 2.71E-02 |
| 117 | GO:0009817: defense response to fungus, incompatible interaction | 2.71E-02 |
| 118 | GO:0009631: cold acclimation | 3.00E-02 |
| 119 | GO:0006631: fatty acid metabolic process | 3.62E-02 |
| 120 | GO:0009744: response to sucrose | 3.84E-02 |
| 121 | GO:0009644: response to high light intensity | 4.06E-02 |
| 122 | GO:0006855: drug transmembrane transport | 4.28E-02 |
| 123 | GO:0006629: lipid metabolic process | 4.65E-02 |
| 124 | GO:0009809: lignin biosynthetic process | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 2 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 3 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 4 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 5 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 6 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 7 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 8 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 9 | GO:0005363: maltose transmembrane transporter activity | 0.00E+00 |
| 10 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 11 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 12 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.05E-07 |
| 13 | GO:0048038: quinone binding | 5.68E-06 |
| 14 | GO:0016491: oxidoreductase activity | 2.18E-05 |
| 15 | GO:0009011: starch synthase activity | 2.35E-05 |
| 16 | GO:0004222: metalloendopeptidase activity | 2.66E-05 |
| 17 | GO:0016615: malate dehydrogenase activity | 5.65E-05 |
| 18 | GO:0030060: L-malate dehydrogenase activity | 7.89E-05 |
| 19 | GO:0004033: aldo-keto reductase (NADP) activity | 1.35E-04 |
| 20 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.75E-04 |
| 21 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.75E-04 |
| 22 | GO:0019203: carbohydrate phosphatase activity | 1.75E-04 |
| 23 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.75E-04 |
| 24 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.75E-04 |
| 25 | GO:0015245: fatty acid transporter activity | 1.75E-04 |
| 26 | GO:0016041: glutamate synthase (ferredoxin) activity | 1.75E-04 |
| 27 | GO:0035671: enone reductase activity | 1.75E-04 |
| 28 | GO:0050308: sugar-phosphatase activity | 1.75E-04 |
| 29 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 3.96E-04 |
| 30 | GO:0008967: phosphoglycolate phosphatase activity | 3.96E-04 |
| 31 | GO:0015099: nickel cation transmembrane transporter activity | 3.96E-04 |
| 32 | GO:0047746: chlorophyllase activity | 3.96E-04 |
| 33 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.96E-04 |
| 34 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 3.96E-04 |
| 35 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.96E-04 |
| 36 | GO:0033201: alpha-1,4-glucan synthase activity | 3.96E-04 |
| 37 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.96E-04 |
| 38 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.96E-04 |
| 39 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.96E-04 |
| 40 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 6.47E-04 |
| 41 | GO:0050307: sucrose-phosphate phosphatase activity | 6.47E-04 |
| 42 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 6.47E-04 |
| 43 | GO:0008864: formyltetrahydrofolate deformylase activity | 6.47E-04 |
| 44 | GO:0070330: aromatase activity | 6.47E-04 |
| 45 | GO:0043169: cation binding | 6.47E-04 |
| 46 | GO:0004373: glycogen (starch) synthase activity | 6.47E-04 |
| 47 | GO:0004176: ATP-dependent peptidase activity | 8.23E-04 |
| 48 | GO:0035250: UDP-galactosyltransferase activity | 9.23E-04 |
| 49 | GO:0048487: beta-tubulin binding | 9.23E-04 |
| 50 | GO:0008508: bile acid:sodium symporter activity | 9.23E-04 |
| 51 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 1.22E-03 |
| 52 | GO:0001053: plastid sigma factor activity | 1.22E-03 |
| 53 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.22E-03 |
| 54 | GO:0016987: sigma factor activity | 1.22E-03 |
| 55 | GO:0018685: alkane 1-monooxygenase activity | 1.56E-03 |
| 56 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.56E-03 |
| 57 | GO:0008374: O-acyltransferase activity | 1.56E-03 |
| 58 | GO:2001070: starch binding | 1.91E-03 |
| 59 | GO:0008237: metallopeptidase activity | 2.09E-03 |
| 60 | GO:0004849: uridine kinase activity | 2.30E-03 |
| 61 | GO:0005242: inward rectifier potassium channel activity | 2.30E-03 |
| 62 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.30E-03 |
| 63 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.30E-03 |
| 64 | GO:0016168: chlorophyll binding | 2.47E-03 |
| 65 | GO:0052747: sinapyl alcohol dehydrogenase activity | 3.13E-03 |
| 66 | GO:0008135: translation factor activity, RNA binding | 3.58E-03 |
| 67 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 3.58E-03 |
| 68 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 4.05E-03 |
| 69 | GO:0008168: methyltransferase activity | 4.60E-03 |
| 70 | GO:0030234: enzyme regulator activity | 5.05E-03 |
| 71 | GO:0043621: protein self-association | 5.35E-03 |
| 72 | GO:0044183: protein binding involved in protein folding | 5.58E-03 |
| 73 | GO:0047372: acylglycerol lipase activity | 5.58E-03 |
| 74 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 6.13E-03 |
| 75 | GO:0008266: poly(U) RNA binding | 7.28E-03 |
| 76 | GO:0031409: pigment binding | 8.51E-03 |
| 77 | GO:0051536: iron-sulfur cluster binding | 9.15E-03 |
| 78 | GO:0004407: histone deacetylase activity | 9.15E-03 |
| 79 | GO:0009055: electron carrier activity | 1.14E-02 |
| 80 | GO:0022891: substrate-specific transmembrane transporter activity | 1.19E-02 |
| 81 | GO:0005249: voltage-gated potassium channel activity | 1.41E-02 |
| 82 | GO:0030551: cyclic nucleotide binding | 1.41E-02 |
| 83 | GO:0050662: coenzyme binding | 1.56E-02 |
| 84 | GO:0016787: hydrolase activity | 1.57E-02 |
| 85 | GO:0046872: metal ion binding | 2.09E-02 |
| 86 | GO:0051213: dioxygenase activity | 2.24E-02 |
| 87 | GO:0008236: serine-type peptidase activity | 2.61E-02 |
| 88 | GO:0015238: drug transmembrane transporter activity | 2.80E-02 |
| 89 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.00E-02 |
| 90 | GO:0008233: peptidase activity | 3.11E-02 |
| 91 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.20E-02 |
| 92 | GO:0003746: translation elongation factor activity | 3.20E-02 |
| 93 | GO:0042803: protein homodimerization activity | 3.96E-02 |
| 94 | GO:0005525: GTP binding | 4.00E-02 |
| 95 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.06E-02 |
| 96 | GO:0005198: structural molecule activity | 4.17E-02 |
| 97 | GO:0051287: NAD binding | 4.39E-02 |
| 98 | GO:0003924: GTPase activity | 4.65E-02 |
| 99 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009571: proplastid stroma | 0.00E+00 |
| 3 | GO:0043235: receptor complex | 0.00E+00 |
| 4 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 5 | GO:0009507: chloroplast | 1.79E-36 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 1.61E-21 |
| 7 | GO:0009941: chloroplast envelope | 2.60E-21 |
| 8 | GO:0009570: chloroplast stroma | 2.77E-17 |
| 9 | GO:0009534: chloroplast thylakoid | 6.91E-14 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.07E-12 |
| 11 | GO:0009579: thylakoid | 9.32E-07 |
| 12 | GO:0009706: chloroplast inner membrane | 1.52E-05 |
| 13 | GO:0048046: apoplast | 3.47E-05 |
| 14 | GO:0009501: amyloplast | 1.35E-04 |
| 15 | GO:0031361: integral component of thylakoid membrane | 1.75E-04 |
| 16 | GO:0009782: photosystem I antenna complex | 1.75E-04 |
| 17 | GO:0010319: stromule | 1.96E-04 |
| 18 | GO:0031357: integral component of chloroplast inner membrane | 3.96E-04 |
| 19 | GO:0009897: external side of plasma membrane | 6.47E-04 |
| 20 | GO:0033281: TAT protein transport complex | 6.47E-04 |
| 21 | GO:0009526: plastid envelope | 1.22E-03 |
| 22 | GO:0030286: dynein complex | 1.22E-03 |
| 23 | GO:0009517: PSII associated light-harvesting complex II | 1.22E-03 |
| 24 | GO:0055035: plastid thylakoid membrane | 1.56E-03 |
| 25 | GO:0009512: cytochrome b6f complex | 1.56E-03 |
| 26 | GO:0010287: plastoglobule | 1.72E-03 |
| 27 | GO:0031977: thylakoid lumen | 4.56E-03 |
| 28 | GO:0009536: plastid | 5.99E-03 |
| 29 | GO:0031969: chloroplast membrane | 6.34E-03 |
| 30 | GO:0009508: plastid chromosome | 6.70E-03 |
| 31 | GO:0030076: light-harvesting complex | 7.89E-03 |
| 32 | GO:0005875: microtubule associated complex | 8.51E-03 |
| 33 | GO:0042651: thylakoid membrane | 9.80E-03 |
| 34 | GO:0009654: photosystem II oxygen evolving complex | 9.80E-03 |
| 35 | GO:0009543: chloroplast thylakoid lumen | 1.19E-02 |
| 36 | GO:0009523: photosystem II | 1.64E-02 |
| 37 | GO:0019898: extrinsic component of membrane | 1.64E-02 |
| 38 | GO:0009295: nucleoid | 2.06E-02 |
| 39 | GO:0030529: intracellular ribonucleoprotein complex | 2.24E-02 |
| 40 | GO:0016021: integral component of membrane | 4.35E-02 |