Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G42270

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
2GO:0017038: protein import0.00E+00
3GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
4GO:0090706: specification of plant organ position0.00E+00
5GO:0071482: cellular response to light stimulus6.98E-08
6GO:0065002: intracellular protein transmembrane transport3.64E-05
7GO:0043609: regulation of carbon utilization3.64E-05
8GO:0010450: inflorescence meristem growth3.64E-05
9GO:0000305: response to oxygen radical3.64E-05
10GO:0019646: aerobic electron transport chain3.64E-05
11GO:0043953: protein transport by the Tat complex3.64E-05
12GO:0055114: oxidation-reduction process1.16E-04
13GO:0071230: cellular response to amino acid stimulus1.58E-04
14GO:0045165: cell fate commitment1.58E-04
15GO:0006000: fructose metabolic process1.58E-04
16GO:0006749: glutathione metabolic process3.14E-04
17GO:0010109: regulation of photosynthesis3.14E-04
18GO:0043097: pyrimidine nucleoside salvage4.01E-04
19GO:0007094: mitotic spindle assembly checkpoint4.01E-04
20GO:1902183: regulation of shoot apical meristem development4.01E-04
21GO:0010158: abaxial cell fate specification4.01E-04
22GO:0006206: pyrimidine nucleobase metabolic process4.92E-04
23GO:0009853: photorespiration5.07E-04
24GO:0042372: phylloquinone biosynthetic process5.88E-04
25GO:0009854: oxidative photosynthetic carbon pathway5.88E-04
26GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway6.87E-04
27GO:1900056: negative regulation of leaf senescence6.87E-04
28GO:0006605: protein targeting7.90E-04
29GO:0010093: specification of floral organ identity8.97E-04
30GO:0006002: fructose 6-phosphate metabolic process8.97E-04
31GO:2000024: regulation of leaf development1.01E-03
32GO:0000373: Group II intron splicing1.01E-03
33GO:0010380: regulation of chlorophyll biosynthetic process1.12E-03
34GO:0018119: peptidyl-cysteine S-nitrosylation1.36E-03
35GO:0046856: phosphatidylinositol dephosphorylation1.36E-03
36GO:0006816: calcium ion transport1.36E-03
37GO:0009773: photosynthetic electron transport in photosystem I1.36E-03
38GO:0018107: peptidyl-threonine phosphorylation1.62E-03
39GO:0009933: meristem structural organization1.76E-03
40GO:0019253: reductive pentose-phosphate cycle1.76E-03
41GO:0006636: unsaturated fatty acid biosynthetic process2.04E-03
42GO:0009944: polarity specification of adaxial/abaxial axis2.18E-03
43GO:2000377: regulation of reactive oxygen species metabolic process2.18E-03
44GO:0006874: cellular calcium ion homeostasis2.33E-03
45GO:0051321: meiotic cell cycle2.48E-03
46GO:0009686: gibberellin biosynthetic process2.80E-03
47GO:0009658: chloroplast organization3.13E-03
48GO:0042254: ribosome biogenesis3.19E-03
49GO:0042631: cellular response to water deprivation3.30E-03
50GO:0010305: leaf vascular tissue pattern formation3.47E-03
51GO:0010268: brassinosteroid homeostasis3.47E-03
52GO:0071472: cellular response to salt stress3.47E-03
53GO:0010154: fruit development3.47E-03
54GO:0007059: chromosome segregation3.64E-03
55GO:0009646: response to absence of light3.64E-03
56GO:0016132: brassinosteroid biosynthetic process4.00E-03
57GO:0016032: viral process4.19E-03
58GO:0009630: gravitropism4.19E-03
59GO:0010090: trichome morphogenesis4.37E-03
60GO:0009567: double fertilization forming a zygote and endosperm4.56E-03
61GO:0016125: sterol metabolic process4.56E-03
62GO:0045454: cell redox homeostasis4.62E-03
63GO:0010027: thylakoid membrane organization5.15E-03
64GO:0016126: sterol biosynthetic process5.15E-03
65GO:0006499: N-terminal protein myristoylation6.61E-03
66GO:0009910: negative regulation of flower development6.83E-03
67GO:0009631: cold acclimation6.83E-03
68GO:0045087: innate immune response7.28E-03
69GO:0009416: response to light stimulus1.01E-02
70GO:0006364: rRNA processing1.07E-02
71GO:0009585: red, far-red light phototransduction1.07E-02
72GO:0009909: regulation of flower development1.15E-02
73GO:0018105: peptidyl-serine phosphorylation1.40E-02
74GO:0009058: biosynthetic process1.67E-02
75GO:0006633: fatty acid biosynthetic process1.89E-02
76GO:0006979: response to oxidative stress2.07E-02
77GO:0007166: cell surface receptor signaling pathway2.23E-02
78GO:0080167: response to karrikin3.22E-02
79GO:0015979: photosynthesis3.54E-02
80GO:0006886: intracellular protein transport3.74E-02
81GO:0007275: multicellular organism development4.03E-02
82GO:0006397: mRNA processing4.38E-02
83GO:0009793: embryo development ending in seed dormancy4.73E-02
RankGO TermAdjusted P value
1GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
2GO:0004760: serine-pyruvate transaminase activity0.00E+00
3GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
4GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
5GO:0008974: phosphoribulokinase activity0.00E+00
6GO:0008465: glycerate dehydrogenase activity0.00E+00
7GO:0050281: serine-glyoxylate transaminase activity0.00E+00
8GO:0051777: ent-kaurenoate oxidase activity3.64E-05
9GO:0008066: glutamate receptor activity3.64E-05
10GO:0003954: NADH dehydrogenase activity7.86E-05
11GO:0004362: glutathione-disulfide reductase activity9.09E-05
12GO:0009977: proton motive force dependent protein transmembrane transporter activity9.09E-05
13GO:0004312: fatty acid synthase activity9.09E-05
14GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.58E-04
15GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity1.58E-04
16GO:0015462: ATPase-coupled protein transmembrane transporter activity1.58E-04
17GO:0008253: 5'-nucleotidase activity1.58E-04
18GO:0004148: dihydrolipoyl dehydrogenase activity1.58E-04
19GO:0008453: alanine-glyoxylate transaminase activity3.14E-04
20GO:0004506: squalene monooxygenase activity3.14E-04
21GO:0050660: flavin adenine dinucleotide binding4.14E-04
22GO:0042578: phosphoric ester hydrolase activity4.92E-04
23GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity4.92E-04
24GO:2001070: starch binding4.92E-04
25GO:0004849: uridine kinase activity5.88E-04
26GO:0004602: glutathione peroxidase activity5.88E-04
27GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1.49E-03
28GO:0005262: calcium channel activity1.62E-03
29GO:0008266: poly(U) RNA binding1.76E-03
30GO:0005217: intracellular ligand-gated ion channel activity1.89E-03
31GO:0004970: ionotropic glutamate receptor activity1.89E-03
32GO:0008483: transaminase activity4.75E-03
33GO:0016491: oxidoreductase activity5.14E-03
34GO:0005524: ATP binding5.94E-03
35GO:0050897: cobalt ion binding6.83E-03
36GO:0003746: translation elongation factor activity7.28E-03
37GO:0050661: NADP binding7.97E-03
38GO:0051287: NAD binding9.93E-03
39GO:0003777: microtubule motor activity1.15E-02
40GO:0005507: copper ion binding1.44E-02
41GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.92E-02
42GO:0008017: microtubule binding2.09E-02
43GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.40E-02
44GO:0042802: identical protein binding2.40E-02
45GO:0003723: RNA binding4.81E-02
RankGO TermAdjusted P value
1GO:0043235: receptor complex0.00E+00
2GO:0009507: chloroplast2.48E-13
3GO:0031304: intrinsic component of mitochondrial inner membrane8.72E-08
4GO:0009570: chloroplast stroma2.30E-06
5GO:0031361: integral component of thylakoid membrane3.64E-05
6GO:0009535: chloroplast thylakoid membrane6.04E-05
7GO:0033281: TAT protein transport complex1.58E-04
8GO:0009579: thylakoid2.72E-04
9GO:0009534: chloroplast thylakoid2.76E-04
10GO:0005828: kinetochore microtubule3.14E-04
11GO:0000776: kinetochore4.01E-04
12GO:0000777: condensed chromosome kinetochore5.88E-04
13GO:0048046: apoplast9.59E-04
14GO:0005876: spindle microtubule1.12E-03
15GO:0010287: plastoglobule1.41E-03
16GO:0005777: peroxisome1.77E-03
17GO:0010319: stromule4.75E-03
18GO:0030529: intracellular ribonucleoprotein complex5.15E-03
19GO:0009941: chloroplast envelope6.37E-03
20GO:0005747: mitochondrial respiratory chain complex I1.23E-02
21GO:0009543: chloroplast thylakoid lumen1.61E-02
22GO:0009524: phragmoplast1.67E-02
23GO:0005759: mitochondrial matrix1.89E-02
24GO:0005886: plasma membrane2.59E-02
25GO:0080008: Cul4-RING E3 ubiquitin ligase complex2.95E-02
26GO:0005874: microtubule3.14E-02
27GO:0005743: mitochondrial inner membrane4.03E-02
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Gene type



Gene DE type