gene detail

Gene description

TAIR ID: AT5G42250

Short description: Zinc-binding alcohol dehydrogenase family protein

Pathogen responsiveness: -1.04

General responsiveness: -0.57

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G397055

Wheat:

TA.30600.1.S1_AT

GO biological process

oxidation-reduction process, proteolysis

GO cellular component

cytoplasm, integral component of membrane

GO molecular function

zinc ion binding, metallocarboxypeptidase activity, alcohol dehydrogenase (NAD) activity

Protein domain

Pfam	PF00107, Zinc-binding dehydrogenase
Pfam	PF08240, Alcohol dehydrogenase GroES-like domain

Metabolic pathway

PWY-6333: acetaldehyde biosynthesis I
PWY-5079: phenylalanine degradation III
ETOH-ACETYLCOA-ANA-PWY: ethanol degradation I
PWY-5486: pyruvate fermentation to ethanol II
PWY66-21: ethanol degradation II

KEGG pathway

PATH:ath01200: Carbon metabolism
PATH:ath00010: Glycolysis / Gluconeogenesis
PATH:ath00071: Fatty acid degradation
PATH:ath00350: Tyrosine metabolism

Transcriptional regulation

Regulator:
AT2G20180

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	-1.79	9.84E-10
GSE13739	Col, eds, control 0 h	Col, eds, G.orontii 6 h	-2.16	5.66E-12
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-2.54	2.15E-11
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-1.99	1.52E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	-2.01	1.34E-09
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	2.00	1.62E-04
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	1.69	5.46E-04