GO Enrichment Analysis of Co-expressed Genes with
AT5G42250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 2 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 3 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.19E-15 |
| 4 | GO:0018298: protein-chromophore linkage | 5.05E-11 |
| 5 | GO:0009769: photosynthesis, light harvesting in photosystem II | 4.85E-08 |
| 6 | GO:0009645: response to low light intensity stimulus | 4.85E-08 |
| 7 | GO:0015979: photosynthesis | 1.53E-07 |
| 8 | GO:0010218: response to far red light | 5.17E-07 |
| 9 | GO:0010114: response to red light | 1.26E-06 |
| 10 | GO:0009644: response to high light intensity | 1.50E-06 |
| 11 | GO:0009416: response to light stimulus | 1.94E-06 |
| 12 | GO:0010600: regulation of auxin biosynthetic process | 2.26E-06 |
| 13 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 8.63E-06 |
| 14 | GO:0010928: regulation of auxin mediated signaling pathway | 1.59E-05 |
| 15 | GO:0015812: gamma-aminobutyric acid transport | 4.45E-05 |
| 16 | GO:0032958: inositol phosphate biosynthetic process | 4.45E-05 |
| 17 | GO:0051170: nuclear import | 1.10E-04 |
| 18 | GO:0048511: rhythmic process | 1.30E-04 |
| 19 | GO:0003333: amino acid transmembrane transport | 1.30E-04 |
| 20 | GO:0010017: red or far-red light signaling pathway | 1.44E-04 |
| 21 | GO:1902448: positive regulation of shade avoidance | 1.89E-04 |
| 22 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 1.89E-04 |
| 23 | GO:0006020: inositol metabolic process | 2.78E-04 |
| 24 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 2.78E-04 |
| 25 | GO:0044211: CTP salvage | 2.78E-04 |
| 26 | GO:0009765: photosynthesis, light harvesting | 3.73E-04 |
| 27 | GO:0044206: UMP salvage | 3.73E-04 |
| 28 | GO:0015846: polyamine transport | 3.73E-04 |
| 29 | GO:0030104: water homeostasis | 3.73E-04 |
| 30 | GO:0032876: negative regulation of DNA endoreduplication | 4.75E-04 |
| 31 | GO:0043097: pyrimidine nucleoside salvage | 4.75E-04 |
| 32 | GO:0000160: phosphorelay signal transduction system | 5.43E-04 |
| 33 | GO:0006206: pyrimidine nucleobase metabolic process | 5.82E-04 |
| 34 | GO:0009635: response to herbicide | 5.82E-04 |
| 35 | GO:0009637: response to blue light | 6.50E-04 |
| 36 | GO:0009861: jasmonic acid and ethylene-dependent systemic resistance | 6.94E-04 |
| 37 | GO:0045892: negative regulation of transcription, DNA-templated | 8.00E-04 |
| 38 | GO:0010161: red light signaling pathway | 8.11E-04 |
| 39 | GO:0009640: photomorphogenesis | 8.29E-04 |
| 40 | GO:0008643: carbohydrate transport | 8.93E-04 |
| 41 | GO:0009704: de-etiolation | 9.32E-04 |
| 42 | GO:0032875: regulation of DNA endoreduplication | 9.32E-04 |
| 43 | GO:0010099: regulation of photomorphogenesis | 1.06E-03 |
| 44 | GO:0009827: plant-type cell wall modification | 1.06E-03 |
| 45 | GO:0009585: red, far-red light phototransduction | 1.10E-03 |
| 46 | GO:0090333: regulation of stomatal closure | 1.19E-03 |
| 47 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 1.32E-03 |
| 48 | GO:0009641: shade avoidance | 1.47E-03 |
| 49 | GO:0055062: phosphate ion homeostasis | 1.47E-03 |
| 50 | GO:0018107: peptidyl-threonine phosphorylation | 1.92E-03 |
| 51 | GO:0009718: anthocyanin-containing compound biosynthetic process | 1.92E-03 |
| 52 | GO:0009266: response to temperature stimulus | 2.09E-03 |
| 53 | GO:0090351: seedling development | 2.25E-03 |
| 54 | GO:0042023: DNA endoreduplication | 2.42E-03 |
| 55 | GO:0007623: circadian rhythm | 2.63E-03 |
| 56 | GO:0009269: response to desiccation | 2.96E-03 |
| 57 | GO:0009693: ethylene biosynthetic process | 3.33E-03 |
| 58 | GO:0071215: cellular response to abscisic acid stimulus | 3.33E-03 |
| 59 | GO:0010087: phloem or xylem histogenesis | 3.93E-03 |
| 60 | GO:0006814: sodium ion transport | 4.35E-03 |
| 61 | GO:0006351: transcription, DNA-templated | 4.36E-03 |
| 62 | GO:0000302: response to reactive oxygen species | 4.77E-03 |
| 63 | GO:0080167: response to karrikin | 5.00E-03 |
| 64 | GO:1901657: glycosyl compound metabolic process | 5.22E-03 |
| 65 | GO:0015995: chlorophyll biosynthetic process | 6.89E-03 |
| 66 | GO:0048573: photoperiodism, flowering | 6.89E-03 |
| 67 | GO:0009817: defense response to fungus, incompatible interaction | 7.39E-03 |
| 68 | GO:0009409: response to cold | 7.42E-03 |
| 69 | GO:0010119: regulation of stomatal movement | 8.18E-03 |
| 70 | GO:0006865: amino acid transport | 8.44E-03 |
| 71 | GO:0042542: response to hydrogen peroxide | 1.01E-02 |
| 72 | GO:0008283: cell proliferation | 1.04E-02 |
| 73 | GO:0006355: regulation of transcription, DNA-templated | 1.22E-02 |
| 74 | GO:0009737: response to abscisic acid | 1.32E-02 |
| 75 | GO:0006857: oligopeptide transport | 1.35E-02 |
| 76 | GO:0009909: regulation of flower development | 1.38E-02 |
| 77 | GO:0035556: intracellular signal transduction | 1.39E-02 |
| 78 | GO:0009624: response to nematode | 1.65E-02 |
| 79 | GO:0055085: transmembrane transport | 1.67E-02 |
| 80 | GO:0018105: peptidyl-serine phosphorylation | 1.68E-02 |
| 81 | GO:0006457: protein folding | 1.70E-02 |
| 82 | GO:0000398: mRNA splicing, via spliceosome | 1.83E-02 |
| 83 | GO:0009058: biosynthetic process | 2.01E-02 |
| 84 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.51E-02 |
| 85 | GO:0010468: regulation of gene expression | 2.76E-02 |
| 86 | GO:0009658: chloroplast organization | 3.32E-02 |
| 87 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.96E-02 |
| 88 | GO:0005975: carbohydrate metabolic process | 4.03E-02 |
| 89 | GO:0044550: secondary metabolite biosynthetic process | 4.11E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
| 2 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
| 3 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
| 5 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
| 6 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
| 7 | GO:0031409: pigment binding | 4.96E-16 |
| 8 | GO:0016168: chlorophyll binding | 1.79E-13 |
| 9 | GO:0000829: inositol heptakisphosphate kinase activity | 4.45E-05 |
| 10 | GO:0080079: cellobiose glucosidase activity | 4.45E-05 |
| 11 | GO:0000978: RNA polymerase II core promoter proximal region sequence-specific DNA binding | 4.45E-05 |
| 12 | GO:0030371: translation repressor activity | 4.45E-05 |
| 13 | GO:0000828: inositol hexakisphosphate kinase activity | 4.45E-05 |
| 14 | GO:0015185: gamma-aminobutyric acid transmembrane transporter activity | 4.45E-05 |
| 15 | GO:0033857: diphosphoinositol-pentakisphosphate kinase activity | 4.45E-05 |
| 16 | GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.10E-04 |
| 17 | GO:0015180: L-alanine transmembrane transporter activity | 1.10E-04 |
| 18 | GO:0015297: antiporter activity | 2.55E-04 |
| 19 | GO:0015189: L-lysine transmembrane transporter activity | 2.78E-04 |
| 20 | GO:0015181: arginine transmembrane transporter activity | 2.78E-04 |
| 21 | GO:0015203: polyamine transmembrane transporter activity | 2.78E-04 |
| 22 | GO:0000156: phosphorelay response regulator activity | 3.14E-04 |
| 23 | GO:0004845: uracil phosphoribosyltransferase activity | 3.73E-04 |
| 24 | GO:0005313: L-glutamate transmembrane transporter activity | 3.73E-04 |
| 25 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 4.75E-04 |
| 26 | GO:0004849: uridine kinase activity | 6.94E-04 |
| 27 | GO:0015293: symporter activity | 9.25E-04 |
| 28 | GO:0000989: transcription factor activity, transcription factor binding | 1.19E-03 |
| 29 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 1.19E-03 |
| 30 | GO:0015171: amino acid transmembrane transporter activity | 1.21E-03 |
| 31 | GO:0015174: basic amino acid transmembrane transporter activity | 1.32E-03 |
| 32 | GO:0046872: metal ion binding | 1.45E-03 |
| 33 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 1.47E-03 |
| 34 | GO:0047372: acylglycerol lipase activity | 1.61E-03 |
| 35 | GO:0004565: beta-galactosidase activity | 1.92E-03 |
| 36 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.92E-03 |
| 37 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.97E-03 |
| 38 | GO:0003712: transcription cofactor activity | 2.25E-03 |
| 39 | GO:0005351: sugar:proton symporter activity | 2.57E-03 |
| 40 | GO:0004707: MAP kinase activity | 2.96E-03 |
| 41 | GO:0008514: organic anion transmembrane transporter activity | 3.53E-03 |
| 42 | GO:0004497: monooxygenase activity | 5.00E-03 |
| 43 | GO:0102483: scopolin beta-glucosidase activity | 6.89E-03 |
| 44 | GO:0008422: beta-glucosidase activity | 9.27E-03 |
| 45 | GO:0005198: structural molecule activity | 1.13E-02 |
| 46 | GO:0022857: transmembrane transporter activity | 1.58E-02 |
| 47 | GO:0019825: oxygen binding | 1.87E-02 |
| 48 | GO:0015144: carbohydrate transmembrane transporter activity | 2.20E-02 |
| 49 | GO:0005515: protein binding | 2.41E-02 |
| 50 | GO:0005506: iron ion binding | 2.62E-02 |
| 51 | GO:0005215: transporter activity | 2.95E-02 |
| 52 | GO:0046983: protein dimerization activity | 3.55E-02 |
| 53 | GO:0004674: protein serine/threonine kinase activity | 3.77E-02 |
| 54 | GO:0004672: protein kinase activity | 3.90E-02 |
| 55 | GO:0020037: heme binding | 4.19E-02 |
| 56 | GO:0008270: zinc ion binding | 4.30E-02 |
| 57 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 4.65E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030076: light-harvesting complex | 1.09E-13 |
| 2 | GO:0010287: plastoglobule | 8.41E-13 |
| 3 | GO:0009522: photosystem I | 3.59E-12 |
| 4 | GO:0009523: photosystem II | 6.85E-10 |
| 5 | GO:0009579: thylakoid | 6.62E-09 |
| 6 | GO:0009534: chloroplast thylakoid | 1.69E-07 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 1.21E-06 |
| 8 | GO:0016021: integral component of membrane | 1.59E-05 |
| 9 | GO:0042651: thylakoid membrane | 1.17E-04 |
| 10 | GO:0009941: chloroplast envelope | 1.18E-04 |
| 11 | GO:0009517: PSII associated light-harvesting complex II | 3.73E-04 |
| 12 | GO:0016020: membrane | 4.86E-04 |
| 13 | GO:0005680: anaphase-promoting complex | 1.19E-03 |
| 14 | GO:0016604: nuclear body | 1.32E-03 |
| 15 | GO:0009507: chloroplast | 2.51E-03 |
| 16 | GO:0005887: integral component of plasma membrane | 1.00E-02 |
| 17 | GO:0031966: mitochondrial membrane | 1.22E-02 |
| 18 | GO:0016607: nuclear speck | 1.48E-02 |
| 19 | GO:0005623: cell | 1.97E-02 |
| 20 | GO:0005774: vacuolar membrane | 2.44E-02 |