gene detail

Gene description

TAIR ID: AT5G42100

Short description: beta-1,3-glucanase_putative

Pathogen responsiveness: 0.57

General responsiveness: -0.58

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G172537

Wheat:

TAAFFX.73807.1.A1_AT

GO biological process

defense response, carbohydrate metabolic process, cell communication, cell wall organization

GO cellular component

plasmodesma, extracellular region, anchored component of plasma membrane, anchored component of membrane, plasma membrane, plant-type cell wall, cell wall, endoplasmic reticulum

GO molecular function

glucan endo-1,3-beta-D-glucosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, polysaccharide binding

Protein domain

Pfam	PF00332, Glycosyl hydrolases family 17

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT5G13790

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

30 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.55	9.92E-08
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	-1.55	2.93E-06
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	-1.57	1.17E-06
GSE56094	Col, WT, control 6 h	Col, WT, PstDC3000 6 h	-1.72	1.35E-07
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-1.80	1.25E-08
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	-1.84	2.18E-08
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-1.88	1.69E-09
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.90	2.95E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	-1.92	9.52E-03
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.99	3.54E-07

Showing 1 to 10 of 30 entries

Previous1 2 3Next