gene detail

Gene description

TAIR ID: AT5G41100

No short description

Pathogen responsiveness: 0.22

General responsiveness: -1.20

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

plasma membrane, cytoplasm

GO molecular function

molecular_function

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

24 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE16472	Col, WT, Flg22 0 min	Col, WT, Flg22 30 min	3.64	1.33E-02
GSE16472	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	3.58	1.73E-02
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 30 min	2.75	2.78E-02
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	2.35	3.19E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	1.76	7.50E-03
GSE17464	Laer, control	Laer, Flg22 1 h	3.18	2.90E-07
GSE17464	Laer, control	Laer, Flg22 2 h	1.92	1.05E-03
GSE17464	Penta, control	Penta, Flg22 2 h	3.31	1.41E-07
GSE17464	Penta, control	Penta, Flg22 2 h	2.43	5.47E-05
GSE2169	Col, WT, water	Col, WT, chitin 30 min	1.63	6.76E-09
GSE2169	Col, rre1, water	Col, rre1, chitin 30 min	1.86	4.96E-10
GSE2169	Col, rre2, water	Col, rre2, chitin 30 min	1.77	1.19E-09
GSE2538	Col, WT, control	Col, WT, crab shell chitin 30 min	2.37	1.19E-06
GSE2538	Col, WT, control	Col, WT, purified chitin octamer 30 min	2.43	1.21E-06
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.75	6.80E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.65	8.46E-09
GSE4746	Col, WT, water 30 min	Col, WT, chitooctaose 30 min	1.67	2.17E-03
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	2.03	8.08E-05
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	1.93	3.88E-08
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	2.14	8.48E-09
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.57	1.85E-03
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	1.84	1.53E-08
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.53	2.88E-03
GSE8319	Col, WT, control	Col, WT, chitooctaose 30 min	2.04	5.23E-12