Gene: AT5G41010
     


Gene description


TAIR ID: AT5G41010

Short description: DNA directed RNA polymerase, 7 kDa subunit

Pathogen responsiveness: -1.75

General responsiveness: -1.42

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G146331  

Wheat: No orthologous gene

GO biological process


transcription, DNA-templated


GO cellular component


DNA-directed RNA polymerase II, core complex, DNA-directed RNA polymerase IV complex, nucleus, DNA-directed RNA polymerase III complex, DNA-directed RNA polymerase I complex


GO molecular function


RNA polymerase II activity, RNA polymerase I activity, DNA-directed 5'-3' RNA polymerase activity, RNA polymerase III activity, metal ion binding, DNA binding


Protein domain


PfamPF03604, DNA directed RNA polymerase, 7 kDa subunit
SMARTSM00659, RPOLCX

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT1G51600, AT3G24050, AT4G34680, AT2G45050, AT3G60530

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


3 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h2.143.09E-02
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.661.19E-09
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.566.07E-03






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