GO Enrichment Analysis of Co-expressed Genes with
AT5G41010
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 2 | GO:0017126: nucleologenesis | 0.00E+00 |
| 3 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 4 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 5 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 6 | GO:0006412: translation | 4.56E-41 |
| 7 | GO:0042254: ribosome biogenesis | 2.17E-13 |
| 8 | GO:0006626: protein targeting to mitochondrion | 3.02E-09 |
| 9 | GO:0006364: rRNA processing | 3.14E-07 |
| 10 | GO:0010162: seed dormancy process | 8.71E-06 |
| 11 | GO:0006413: translational initiation | 5.41E-05 |
| 12 | GO:0000470: maturation of LSU-rRNA | 6.12E-05 |
| 13 | GO:0000469: cleavage involved in rRNA processing | 1.84E-04 |
| 14 | GO:0030490: maturation of SSU-rRNA | 1.84E-04 |
| 15 | GO:0000494: box C/D snoRNA 3'-end processing | 1.84E-04 |
| 16 | GO:1990258: histone glutamine methylation | 1.84E-04 |
| 17 | GO:0006913: nucleocytoplasmic transport | 3.60E-04 |
| 18 | GO:0045905: positive regulation of translational termination | 4.15E-04 |
| 19 | GO:0045901: positive regulation of translational elongation | 4.15E-04 |
| 20 | GO:0048569: post-embryonic animal organ development | 4.15E-04 |
| 21 | GO:0006452: translational frameshifting | 4.15E-04 |
| 22 | GO:0009967: positive regulation of signal transduction | 4.15E-04 |
| 23 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.15E-04 |
| 24 | GO:0045039: protein import into mitochondrial inner membrane | 6.76E-04 |
| 25 | GO:0009944: polarity specification of adaxial/abaxial axis | 7.29E-04 |
| 26 | GO:0000027: ribosomal large subunit assembly | 7.29E-04 |
| 27 | GO:0030150: protein import into mitochondrial matrix | 7.29E-04 |
| 28 | GO:0051302: regulation of cell division | 8.02E-04 |
| 29 | GO:0007005: mitochondrion organization | 9.58E-04 |
| 30 | GO:0006986: response to unfolded protein | 9.65E-04 |
| 31 | GO:0051085: chaperone mediated protein folding requiring cofactor | 9.65E-04 |
| 32 | GO:0009855: determination of bilateral symmetry | 9.65E-04 |
| 33 | GO:0009294: DNA mediated transformation | 1.04E-03 |
| 34 | GO:0000460: maturation of 5.8S rRNA | 1.28E-03 |
| 35 | GO:0042274: ribosomal small subunit biogenesis | 1.28E-03 |
| 36 | GO:0042273: ribosomal large subunit biogenesis | 1.28E-03 |
| 37 | GO:0006606: protein import into nucleus | 1.31E-03 |
| 38 | GO:0005513: detection of calcium ion | 1.63E-03 |
| 39 | GO:0010375: stomatal complex patterning | 1.63E-03 |
| 40 | GO:0031167: rRNA methylation | 1.63E-03 |
| 41 | GO:0006354: DNA-templated transcription, elongation | 2.01E-03 |
| 42 | GO:0016070: RNA metabolic process | 2.01E-03 |
| 43 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.41E-03 |
| 44 | GO:0009955: adaxial/abaxial pattern specification | 2.41E-03 |
| 45 | GO:0000054: ribosomal subunit export from nucleus | 2.41E-03 |
| 46 | GO:0010374: stomatal complex development | 2.83E-03 |
| 47 | GO:0080186: developmental vegetative growth | 2.83E-03 |
| 48 | GO:0000028: ribosomal small subunit assembly | 3.28E-03 |
| 49 | GO:0001558: regulation of cell growth | 3.75E-03 |
| 50 | GO:0006367: transcription initiation from RNA polymerase II promoter | 3.75E-03 |
| 51 | GO:0010204: defense response signaling pathway, resistance gene-independent | 3.75E-03 |
| 52 | GO:0010099: regulation of photomorphogenesis | 3.75E-03 |
| 53 | GO:0022900: electron transport chain | 3.75E-03 |
| 54 | GO:0001510: RNA methylation | 3.75E-03 |
| 55 | GO:0006379: mRNA cleavage | 4.25E-03 |
| 56 | GO:0016573: histone acetylation | 4.76E-03 |
| 57 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 5.30E-03 |
| 58 | GO:0030422: production of siRNA involved in RNA interference | 5.30E-03 |
| 59 | GO:0006820: anion transport | 6.43E-03 |
| 60 | GO:0015031: protein transport | 7.19E-03 |
| 61 | GO:0016569: covalent chromatin modification | 9.58E-03 |
| 62 | GO:0006414: translational elongation | 1.06E-02 |
| 63 | GO:0015992: proton transport | 1.10E-02 |
| 64 | GO:0000398: mRNA splicing, via spliceosome | 1.18E-02 |
| 65 | GO:0071215: cellular response to abscisic acid stimulus | 1.25E-02 |
| 66 | GO:0019722: calcium-mediated signaling | 1.32E-02 |
| 67 | GO:0009561: megagametogenesis | 1.32E-02 |
| 68 | GO:0008033: tRNA processing | 1.48E-02 |
| 69 | GO:0010197: polar nucleus fusion | 1.56E-02 |
| 70 | GO:0009960: endosperm development | 1.56E-02 |
| 71 | GO:0016049: cell growth | 2.74E-02 |
| 72 | GO:0006811: ion transport | 3.05E-02 |
| 73 | GO:0048527: lateral root development | 3.15E-02 |
| 74 | GO:0045087: innate immune response | 3.36E-02 |
| 75 | GO:0006099: tricarboxylic acid cycle | 3.47E-02 |
| 76 | GO:0000154: rRNA modification | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 3.64E-53 |
| 2 | GO:0003723: RNA binding | 5.68E-07 |
| 3 | GO:0003729: mRNA binding | 8.63E-07 |
| 4 | GO:0030515: snoRNA binding | 1.53E-06 |
| 5 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.51E-05 |
| 6 | GO:0004407: histone deacetylase activity | 3.79E-05 |
| 7 | GO:0003746: translation elongation factor activity | 4.01E-05 |
| 8 | GO:0000166: nucleotide binding | 5.23E-05 |
| 9 | GO:0003743: translation initiation factor activity | 8.85E-05 |
| 10 | GO:0048037: cofactor binding | 1.84E-04 |
| 11 | GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H | 1.84E-04 |
| 12 | GO:1990259: histone-glutamine methyltransferase activity | 1.84E-04 |
| 13 | GO:0042134: rRNA primary transcript binding | 1.84E-04 |
| 14 | GO:0001055: RNA polymerase II activity | 2.64E-04 |
| 15 | GO:0019843: rRNA binding | 3.02E-04 |
| 16 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 4.15E-04 |
| 17 | GO:0043021: ribonucleoprotein complex binding | 4.15E-04 |
| 18 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 4.15E-04 |
| 19 | GO:0005078: MAP-kinase scaffold activity | 4.15E-04 |
| 20 | GO:0008649: rRNA methyltransferase activity | 6.76E-04 |
| 21 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 6.76E-04 |
| 22 | GO:0070181: small ribosomal subunit rRNA binding | 6.76E-04 |
| 23 | GO:0051087: chaperone binding | 8.02E-04 |
| 24 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.77E-04 |
| 25 | GO:0008235: metalloexopeptidase activity | 2.83E-03 |
| 26 | GO:0043022: ribosome binding | 3.28E-03 |
| 27 | GO:0015288: porin activity | 3.28E-03 |
| 28 | GO:0008135: translation factor activity, RNA binding | 3.75E-03 |
| 29 | GO:0008308: voltage-gated anion channel activity | 3.75E-03 |
| 30 | GO:0001054: RNA polymerase I activity | 5.85E-03 |
| 31 | GO:0044183: protein binding involved in protein folding | 5.85E-03 |
| 32 | GO:0001056: RNA polymerase III activity | 6.43E-03 |
| 33 | GO:0000049: tRNA binding | 6.43E-03 |
| 34 | GO:0005515: protein binding | 6.67E-03 |
| 35 | GO:0015266: protein channel activity | 7.03E-03 |
| 36 | GO:0051082: unfolded protein binding | 1.02E-02 |
| 37 | GO:0003924: GTPase activity | 1.14E-02 |
| 38 | GO:0008565: protein transporter activity | 1.53E-02 |
| 39 | GO:0008536: Ran GTPase binding | 1.56E-02 |
| 40 | GO:0008080: N-acetyltransferase activity | 1.56E-02 |
| 41 | GO:0050897: cobalt ion binding | 3.15E-02 |
| 42 | GO:0005507: copper ion binding | 3.64E-02 |
| 43 | GO:0005525: GTP binding | 4.35E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 3 | GO:0005730: nucleolus | 3.70E-43 |
| 4 | GO:0022626: cytosolic ribosome | 6.50E-36 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 3.02E-32 |
| 6 | GO:0005840: ribosome | 1.89E-29 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 1.25E-23 |
| 8 | GO:0015934: large ribosomal subunit | 1.79E-11 |
| 9 | GO:0032040: small-subunit processome | 2.03E-09 |
| 10 | GO:0005737: cytoplasm | 7.26E-09 |
| 11 | GO:0005829: cytosol | 3.78E-08 |
| 12 | GO:0009506: plasmodesma | 1.20E-07 |
| 13 | GO:0005834: heterotrimeric G-protein complex | 1.33E-05 |
| 14 | GO:0005758: mitochondrial intermembrane space | 3.79E-05 |
| 15 | GO:0005773: vacuole | 4.88E-05 |
| 16 | GO:0031428: box C/D snoRNP complex | 6.12E-05 |
| 17 | GO:0005774: vacuolar membrane | 1.61E-04 |
| 18 | GO:0005742: mitochondrial outer membrane translocase complex | 1.81E-04 |
| 19 | GO:0015030: Cajal body | 2.64E-04 |
| 20 | GO:0000418: DNA-directed RNA polymerase IV complex | 3.10E-04 |
| 21 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.14E-04 |
| 22 | GO:0035267: NuA4 histone acetyltransferase complex | 4.15E-04 |
| 23 | GO:0070545: PeBoW complex | 4.15E-04 |
| 24 | GO:0005759: mitochondrial matrix | 4.35E-04 |
| 25 | GO:0005743: mitochondrial inner membrane | 4.41E-04 |
| 26 | GO:0019013: viral nucleocapsid | 4.70E-04 |
| 27 | GO:0005672: transcription factor TFIIA complex | 6.76E-04 |
| 28 | GO:0005618: cell wall | 7.94E-04 |
| 29 | GO:0005741: mitochondrial outer membrane | 8.78E-04 |
| 30 | GO:0015935: small ribosomal subunit | 8.78E-04 |
| 31 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.12E-03 |
| 32 | GO:0005747: mitochondrial respiratory chain complex I | 1.25E-03 |
| 33 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.69E-03 |
| 34 | GO:0000974: Prp19 complex | 2.01E-03 |
| 35 | GO:0016272: prefoldin complex | 2.41E-03 |
| 36 | GO:0016363: nuclear matrix | 2.41E-03 |
| 37 | GO:0030687: preribosome, large subunit precursor | 2.83E-03 |
| 38 | GO:0005688: U6 snRNP | 3.28E-03 |
| 39 | GO:0046930: pore complex | 3.75E-03 |
| 40 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 3.75E-03 |
| 41 | GO:0005622: intracellular | 3.76E-03 |
| 42 | GO:0005736: DNA-directed RNA polymerase I complex | 4.25E-03 |
| 43 | GO:0005666: DNA-directed RNA polymerase III complex | 4.76E-03 |
| 44 | GO:0071011: precatalytic spliceosome | 4.76E-03 |
| 45 | GO:0071013: catalytic step 2 spliceosome | 5.85E-03 |
| 46 | GO:0005852: eukaryotic translation initiation factor 3 complex | 5.85E-03 |
| 47 | GO:0005635: nuclear envelope | 7.64E-03 |
| 48 | GO:0005681: spliceosomal complex | 8.44E-03 |
| 49 | GO:0000419: DNA-directed RNA polymerase V complex | 8.93E-03 |
| 50 | GO:0016020: membrane | 1.07E-02 |
| 51 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.32E-02 |
| 52 | GO:0016592: mediator complex | 1.90E-02 |
| 53 | GO:0030529: intracellular ribonucleoprotein complex | 2.35E-02 |
| 54 | GO:0019005: SCF ubiquitin ligase complex | 2.84E-02 |